RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 UEVLDQ8IX04 471 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 IGLV3-32A0A0A0MS00 114 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 LILRA1O75019 489 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ZFAND5O76080 213 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 VENTXO95231 258 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 IFNA5P01569 189 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ZNF726P1Q15940 193 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 EXT1Q16394 746 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 PHLDA2Q53GA4 152 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 OR8G2PQ6IF36 304 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 OR4B1Q8NGF8 309 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 OR6C1Q96RD1 312 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 TMEM222Q9H0R3 208 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 TMEM9BQ9NQ34 198 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 PLEKHJ1Q9NW61 149 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ZNF581Q9P0T4 197 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 NXT1Q9UKK6 140 aaKnown RBP16.22■□□□□ 0.19
HOXC6-202ENST00000394331 SLC45A2Q9UMX9 530 aa16.22■□□□□ 0.19
HOXC6-202ENST00000394331 ZNF850A8MQ14 1090 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 IFNL4K9M1U5 179 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 PLPPR5Q32ZL2 321 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 C6orf201Q7Z4U5 140 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 GCNT2Q8N0V5 402 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 OR8B12Q8NGG6 310 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 OR5D18Q8NGL1 313 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 CMTM2Q8TAZ6 248 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 ALKBH3Q96Q83 286 aaPredicted RBP16.21■□□□□ 0.19
HOXC6-202ENST00000394331 UBE2ZQ9H832 354 aaPredicted RBP16.21■□□□□ 0.19
HOXC6-202ENST00000394331 METTL7AQ9H8H3 244 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 FER1L5A0AVI2 2057 aa16.21■□□□□ 0.19
HOXC6-202ENST00000394331 SHISA8B8ZZ34 492 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 EFNA2O43921 213 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 SCRG1O75711 98 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 CST7O76096 145 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 CLRN1P58418 232 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 C1QL2Q7Z5L3 287 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 TMEM256Q8N2U0 113 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 B3GALT1Q9Y5Z6 326 aa16.21■□□□□ 0.18
HOXC6-202ENST00000394331 IGHG1P01857 330 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 MEF2BQ02080 365 aaPredicted RBP16.2■□□□□ 0.18
HOXC6-202ENST00000394331 Q6ZWC4 215 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 CPEB2Q7Z5Q1 589 aaKnown RBP16.2■□□□□ 0.18
HOXC6-202ENST00000394331 WDYHV1Q96HA8 205 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 Q96M66 194 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 CIB3Q96Q77 187 aaPredicted RBP16.2■□□□□ 0.18
HOXC6-202ENST00000394331 MAGT1Q9H0U3 335 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 RARRES3Q9UL19 164 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 POLR1DQ9Y2S0 133 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 C3orf85A0A1B0GTC6 90 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 OR6C6A6NF89 314 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 LRRC3CA6NJW4 275 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 CD99P14209 185 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 SERF2P84101 59 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF319Q9P2F9 582 aa16.2■□□□□ 0.18
HOXC6-202ENST00000394331 TIAF1O95411 115 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 MORN2Q502X0 79 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 FAM69BQ5VUD6 431 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 TMEM144Q7Z5S9 345 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 LINC01551Q86U37 167 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 COMMD2Q86X83 199 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 SIGLEC12Q96PQ1 595 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 ALKBH7Q9BT30 221 aaPredicted RBP16.19■□□□□ 0.18
HOXC6-202ENST00000394331 TMEM50AO95807 157 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 CEACAM8P31997 349 aaPredicted RBP16.19■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF154Q13106 437 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 SHBQ15464 509 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 PRSS8Q16651 343 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 TDRG1Q3Y452 100 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 ETFRF1Q6IPR1 90 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 WIPI2Q9Y4P8 454 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 TRAPPC1Q9Y5R8 145 aa16.19■□□□□ 0.18
HOXC6-202ENST00000394331 PHF3Q92576 2039 aaKnown RBP16.19■□□□□ 0.18
HOXC6-202ENST00000394331 PTGDSP41222 190 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 TMEM217Q8N7C4 229 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 HDHD3Q9BSH5 251 aaPredicted RBP16.18■□□□□ 0.18
HOXC6-202ENST00000394331 C19orf25Q9UFG5 118 aaPredicted RBP16.18■□□□□ 0.18
HOXC6-202ENST00000394331 PAM16Q9Y3D7 125 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 MPPED1O15442 326 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 HLA-HP01893 362 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 AADACP22760 399 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 LCN15Q6UWW0 184 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 OR10G3Q8NGC4 313 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 PINX1Q96BK5 328 aaKnown RBP16.18■□□□□ 0.18
HOXC6-202ENST00000394331 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 RNF115Q9Y4L5 304 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 OR5G3P0C626 314 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 IL3RAP26951 378 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF121P58317 390 aaPredicted RBP16.18■□□□□ 0.18
HOXC6-202ENST00000394331 FXYD4P59646 89 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 TMEM41BQ5BJD5 291 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 IL22RA2Q969J5 263 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 MANBALQ9NQG1 85 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 LHFPL6Q9Y693 200 aa16.18■□□□□ 0.18
HOXC6-202ENST00000394331 NUPR1O60356 82 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 ZNF737O75373 536 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 OR2J2O76002 312 aa16.17■□□□□ 0.18
HOXC6-202ENST00000394331 MDH2P40926 338 aaKnown RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 MEX3BQ6ZN04 569 aaKnown RBP16.17■□□□□ 0.18
HOXC6-202ENST00000394331 PARD6GQ9BYG4 376 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms