RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 FAM90A14PP0C7W9 464 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 FAM90A24PP0C7X0 464 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 COX5AP20674 150 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 PMELP40967 661 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 DEFA5Q01523 94 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 NHLH2Q02577 135 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 GUSBP1Q15486 140 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 CXorf66Q5JRM2 361 aaPredicted RBP9.41□□□□□ -0.9
TCOF1-203ENST00000394269 Q6P435 159 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 STPG2Q8N412 459 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 Q8NFD4 153 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 OR1S2Q8NGQ3 325 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 LRRC29Q8WV35 223 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 NRIP2Q9BQI9 281 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 REG4Q9BYZ8 158 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 TMEM231Q9H6L2 316 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 H3BP45 60 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 SSSCA1O60232 199 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 HKR1P10072 659 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 IL2RGP31785 369 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 NAAAQ02083 359 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 C1orf185Q5T7R7 199 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 FIP1L1Q6UN15 594 aaKnown RBP9.41□□□□□ -0.9
TCOF1-203ENST00000394269 GFRALQ6UXV0 394 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 SPACA3Q8IXA5 215 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 OR10V1Q8NGI7 309 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 ERGIC1Q969X5 290 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 RSRP1Q9BUV0 290 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 FBXL17Q9UF56 701 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 PCDHB10Q9UN67 800 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 WRBO00258 174 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
TCOF1-203ENST00000394269 CGAP01215 116 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 PGA5P0DJD9 388 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 GNMTQ14749 295 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 HSD17B11Q8NBQ5 300 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 DECR2Q9NUI1 292 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 KCNIP1Q9NZI2 227 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 TAAR3PQ9P1P4 343 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 USF3Q68DE3 2245 aa9.41□□□□□ -0.9
TCOF1-203ENST00000394269 ABCA12Q86UK0 2595 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 PRRG2O14669 202 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 ST8SIA3O43173 380 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 S100GP29377 79 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 HLA-DRB3P79483 266 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 MSMPQ1L6U9 139 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 PCSK4Q6UW60 755 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 IGFL3Q6UXB1 125 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 ZCCHC24Q8N2G6 241 aaKnown RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 GALNT14Q96FL9 552 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 CXXC4Q9H2H0 198 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 RIMS4Q9H426 269 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 RCL1Q9Y2P8 373 aaKnown RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 OR2W1Q9Y3N9 320 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 MBD3L4A6NDZ8 208 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 MBD3L3A6NE82 208 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 FAM24AA6NFZ4 105 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 MBD3L5A6NJ08 208 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 PGLYRP1O75594 196 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 DEDDO75618 318 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 PSG2P11465 335 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 GLIPR1P48060 266 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 LY6DQ14210 128 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 IL13RA2Q14627 380 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 SPRNQ5BIV9 151 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 FAM76BQ5HYJ3 339 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 LDLRAD3Q86YD5 345 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 OR52L2PQ8NGH6 319 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 MBD3L2Q8NHZ7 208 aaPredicted RBP9.4□□□□□ -0.9
TCOF1-203ENST00000394269 TMEM222Q9H0R3 208 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 SLC25A32Q9H2D1 315 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 SLC25A15Q9Y619 301 aa9.4□□□□□ -0.9
TCOF1-203ENST00000394269 A0A1B0GW55 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 MFSD2BA6NFX1 497 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 CST7O76096 145 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 GLAP06280 429 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 CTXN2P0C2S0 81 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L2P0CJ85 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L3P0CJ86 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L4P0CJ87 422 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L5P0CJ88 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L6P0CJ89 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4L7P0CJ90 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 EDDM3BP56851 147 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 HNF4GQ14541 408 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 MOGAT3Q86VF5 341 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 Q8IYB0 196 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 DUX4Q9UBX2 424 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 GLS2Q9UI32 602 aa9.4□□□□□ -0.91
TCOF1-203ENST00000394269 MYO9AB2RTY4 2548 aa9.39□□□□□ -0.91
TCOF1-203ENST00000394269 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
TCOF1-203ENST00000394269 COL10A1Q03692 680 aa9.39□□□□□ -0.91
TCOF1-203ENST00000394269 WDR82Q6UXN9 313 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms