RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MLXQ9UH92 298 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 CARHSP1Q9Y2V2 147 aaKnown RBP12.58□□□□□ -0.4
MKS1-202ENST00000393119 ATP23Q9Y6H3 246 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 SLC25A4P12235 298 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 POLR2GP62487 172 aaKnown RBP eCLIP12.58□□□□□ -0.4
MKS1-202ENST00000393119 IL13RA2Q14627 380 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 ZNF146Q15072 292 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 TMEM108Q6UXF1 575 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 TMEM185AQ8NFB2 350 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 PLK3Q9H4B4 646 aa12.58□□□□□ -0.4
MKS1-202ENST00000393119 IGLV3-9A0A075B6K5 115 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 RNF222A6NCQ9 220 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 SFT2D2O95562 160 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 SELLP14151 372 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 AKR1D1P51857 326 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 PIGPP57054 158 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 GUCA2BQ16661 112 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 GCSAMQ8N6F7 178 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
MKS1-202ENST00000393119 MEGF10Q96KG7 1140 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 BCL2L11O43521 198 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 OR2F2O95006 317 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 DUS4LO95620 317 aaKnown RBP12.57□□□□□ -0.4
MKS1-202ENST00000393119 IGHV1-46P01743 117 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 IFNA4P05014 189 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 HOXB5P09067 269 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 OR4A8P0C604 315 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 ZNF728P0DKX0 622 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 SERPINF1P36955 418 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 CCL8P80075 99 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 COL10A1Q03692 680 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 OR2F1Q13607 317 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 ADIPOQQ15848 244 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 SVBPQ8N300 66 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 OR5M8Q8NGP6 311 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 PHB2Q99623 299 aa12.57□□□□□ -0.4
MKS1-202ENST00000393119 TRDCB7Z8K6 153 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 SH2D1BO14796 132 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 FGF16O43320 207 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 TNFSF12O43508 249 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 CYB5R3P00387 301 aaPredicted RBP12.56□□□□□ -0.4
MKS1-202ENST00000393119 PPYP01298 95 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 HEXAP06865 529 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 ZNF546Q86UE3 836 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 GLYATL2Q8WU03 294 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 OR10C1Q96KK4 312 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 A0A1B0GWJ7 208 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 ZNF497Q6ZNH5 498 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 MRPL24Q96A35 216 aaKnown RBP12.56□□□□□ -0.4
MKS1-202ENST00000393119 COQ2Q96H96 371 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 TRAPPC2LQ9UL33 140 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 PCDHB10Q9UN67 800 aa12.56□□□□□ -0.4
MKS1-202ENST00000393119 C14orf166Q9Y224 244 aaKnown RBP12.56□□□□□ -0.4
MKS1-202ENST00000393119 SVEP1Q4LDE5 3571 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 IGKV1D-17A0A075B6S4 117 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 TEX13DA0A0J9YY54 714 aaPredicted RBP12.55□□□□□ -0.4
MKS1-202ENST00000393119 C5orf51A6NDU8 294 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 DBX1A6NMT0 343 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 HSD17B6O14756 317 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 SIAH2O43255 324 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 GNRHRP30968 328 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 CD80P33681 288 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 GLIPR1P48060 266 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
MKS1-202ENST00000393119 CBLN2Q8IUK8 224 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
MKS1-202ENST00000393119 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 ZNRF1Q8ND25 227 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 PLPPR2Q96GM1 343 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
MKS1-202ENST00000393119 DECR2Q9NUI1 292 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
MKS1-202ENST00000393119 PSG2P11465 335 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 PTAFRP25105 342 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 GABRA2P47869 451 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 BEX5Q5H9J7 111 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 ZNF818PQ6ZRF7 136 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 Q8IYB0 196 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 SFT2D1Q8WV19 159 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 MOB3AQ96BX8 217 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 SPACA1Q9HBV2 294 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 CCL28Q9NRJ3 127 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
MKS1-202ENST00000393119 IGSF10Q6WRI0 2623 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 CTSDP07339 412 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 ACAA1P09110 424 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 OR5AC1P0C628 307 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
MKS1-202ENST00000393119 TUBG1P23258 451 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 CD200P41217 278 aa12.54□□□□□ -0.4
MKS1-202ENST00000393119 CASP6P55212 293 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms