RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 COL6A6A6NMZ7 2263 aa13.04□□□□□ -0.32
CCDC50-201ENST00000392455 AWAT1Q58HT5 328 aa13.04□□□□□ -0.32
CCDC50-201ENST00000392455 SEMG1P04279 462 aa13.04□□□□□ -0.32
CCDC50-201ENST00000392455 NUTF2P61970 127 aaKnown RBP13.04□□□□□ -0.32
CCDC50-201ENST00000392455 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
CCDC50-201ENST00000392455 NCOR1O75376 2440 aa13.04□□□□□ -0.32
CCDC50-201ENST00000392455 A0A087WUJ7 227 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 HMGA1P17096 107 aaKnown RBP13.03□□□□□ -0.32
CCDC50-201ENST00000392455 ANKRD33Q7Z3H0 272 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 LRP12Q9Y561 859 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 CTDSPLO15194 276 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 PITX3O75364 302 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 LEPROTL1O95214 131 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 CD3EP07766 207 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 DLEU7Q6UYE1 221 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 OR4X1Q8NH49 305 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 RAX2Q96IS3 184 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 FUT9Q9Y231 359 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 MRGPREQ86SM8 312 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 ABHD14BQ96IU4 210 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 FOXB1Q99853 325 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 MS4A5Q9H3V2 200 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 B4E171 279 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 PI3P19957 117 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 CAPZBP47756 277 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 FMODQ06828 376 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 C16orf52Q8NHV5 167 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 C16orf92Q96LL3 132 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
CCDC50-201ENST00000392455 TMEM240Q5SV17 173 aa13.03□□□□□ -0.32
CCDC50-201ENST00000392455 TRAV30A0A087WSZ9 112 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 SLC25A17O43808 307 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 HTN1P15515 57 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 GNG10P50151 68 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 P2RX4Q99571 388 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 CD74P04233 296 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 NAT1P18440 290 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 SARGQ9BW04 601 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 RABAC1Q9UI14 185 aa13.02□□□□□ -0.32
CCDC50-201ENST00000392455 IER3P46695 156 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 OR5M9Q8NGP3 310 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 MARVELD1Q9BSK0 173 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 OPN4Q9UHM6 478 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 LILRA5A6NI73 299 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 DLX6P56179 175 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 LINC00469Q8N7U9 141 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 MGST2Q99735 147 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 PAXXQ9BUH6 204 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
CCDC50-201ENST00000392455 SRFP11831 508 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 SPNS2Q8IVW8 549 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 AKIRIN1Q9H9L7 192 aaPredicted RBP13.02□□□□□ -0.33
CCDC50-201ENST00000392455 MED29Q9NX70 200 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 EPPINO95925 133 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 CCL7P80098 99 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
CCDC50-201ENST00000392455 GFYI3L273 518 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 LIMK1P53667 647 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 RTP5Q14D33 572 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 CEACAM16Q2WEN9 425 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 LRRK1Q38SD2 2015 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 OR3A4PP47883 348 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 ATP5IP56385 69 aaPredicted RBP13.01□□□□□ -0.33
CCDC50-201ENST00000392455 C7orf66A4D0T2 115 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 SPTAN1Q13813 2472 aaKnown RBP13.01□□□□□ -0.33
CCDC50-201ENST00000392455 ALG1L2C9J202 215 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 CXCL13O43927 109 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 CDC14BO60729 498 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 MYF5P13349 255 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 FAAP20Q6NZ36 180 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 RNF133Q8WVZ7 376 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
CCDC50-201ENST00000392455 MRPS11P82912 194 aaKnown RBP13.01□□□□□ -0.33
CCDC50-201ENST00000392455 FOXC1Q12948 553 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 ARHGAP5-AS1Q96IT6 56 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 HYPMO75409 117 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 MFAP2P55001 183 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 PLAURQ03405 335 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 SPANXDQ9BXN6 97 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 PLEKHB1Q9UF11 243 aaPredicted RBP13.01□□□□□ -0.33
CCDC50-201ENST00000392455 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
CCDC50-201ENST00000392455 ANKRD20A5PA0PJZ0 165 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 NDUFS8O00217 210 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 CNTD2Q9H8S5 307 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 MTCH2Q9Y6C9 303 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 RSPO2Q6UXX9 243 aaPredicted RBP13□□□□□ -0.33
CCDC50-201ENST00000392455 OR8G5Q8NG78 346 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
CCDC50-201ENST00000392455 NT5CQ8TCD5 201 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms