RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PRRG2O14669 202 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 AKIRIN2Q53H80 203 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 COLCA1Q6ZS62 124 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 FBXL14Q8N1E6 418 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 OR8G5Q8NG78 346 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 OR1J1Q8NGS3 322 aa16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 LILRB1Q8NHL6 650 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-203ENST00000392334 WNT5AP41221 380 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 AKR1C3P42330 323 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 HERV-K104P61576 105 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 MALLQ13021 153 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 GNMTQ14749 295 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 Q6ZS49 121 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 DYRK2Q92630 601 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 BOD1Q96IK1 185 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 ABHD14BQ96IU4 210 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 SEBOXQ9HB31 216 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 SLC7A11Q9UPY5 501 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 ST3GAL6Q9Y274 331 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 UMAD1C9J7I0 102 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 PHF1O43189 567 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 PRH1P02810 166 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 S100A6P06703 90 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 GLI4P10075 376 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 COX5BP10606 129 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 COX5AP20674 150 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 RBM11P57052 281 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 EWSR1Q01844 656 aaKnown RBP eCLIP16.91■□□□□ 0.35e-7■■■□□ 15.4
CSNK1D-203ENST00000392334 NHLH2Q02577 135 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 SPATA46Q5T0L3 261 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 SH3BGRL3Q9H299 93 aa16.91■□□□□ 0.3
CSNK1D-203ENST00000392334 PCNX1Q96RV3 2341 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 TRDCB7Z8K6 153 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 M0R036 132 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF205O95201 554 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 CNOT4O95628 575 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF14P17017 642 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 RAB5AP20339 215 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 BMP5P22003 454 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 AADACP22760 399 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 HOXC12P31275 282 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 TIMP3P35625 211 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 FHITP49789 147 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 SRSF7Q16629 238 aaKnown RBP eCLIP16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 ZNF474Q6S9Z5 364 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 Q6ZPA2 131 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 SLC35G3Q8N808 338 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 Q8NFD4 153 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 OR11L1Q8NGX0 322 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 PIGCQ92535 297 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 TCEAL7Q9BRU2 100 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 KCNJ16Q9NPI9 418 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 CFAP46Q8IYW2 2715 aa16.9■□□□□ 0.3
CSNK1D-203ENST00000392334 MPPED1O15442 326 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 PPYP01298 95 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FUT3P21217 361 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 RND3P61587 244 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 WDR31Q8NA23 367 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 APOBEC3DQ96AK3 386 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 TP53RKQ96S44 253 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 POLEQ07864 2286 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 C3orf85A0A1B0GTC6 90 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 A0A1W2PPH5 198 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A10PA6NDY2 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A18PA6NE21 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A16PA6NEW6 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A20PA6NIJ5 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A8PA6NJQ4 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A7PA6NKC0 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 A6NLC8 198 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A22PA8MWA6 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A12PA8MX19 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A5PA8MXJ8 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A23PA8MXZ1 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 PITX3O75364 302 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 IGHV2-5P01817 119 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A15PP0C7V4 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A13PP0C7W8 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A14PP0C7W9 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM90A24PP0C7X0 464 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 ZNF266Q14584 549 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 CLINT1Q14677 625 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 OR2C3Q8N628 320 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 HSD17B11Q8NBQ5 300 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 TMEM56Q96MV1 263 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 TMEM222Q9H0R3 208 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 CRIM1Q9NZV1 1036 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 ZNF835Q9Y2P0 537 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 TMEM56-RWDD3S4R434 201 aa16.89■□□□□ 0.29
CSNK1D-203ENST00000392334 PRR14LQ5THK1 2151 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 ZNF816-ZNF321PA0A0X1KG74 233 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 FAM221AA4D161 298 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 C1QL1O75973 258 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 S100A9P06702 114 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 SULT1A1P50225 295 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 DPPA2Q7Z7J5 298 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 SPSB4Q96A44 273 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 SPIN2AQ99865 258 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 SPIN2BQ9BPZ2 258 aa16.88■□□□□ 0.29
CSNK1D-203ENST00000392334 ZNF251Q9BRH9 671 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms