RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
SMN1-202ENST00000380707 TNFSF8P32971 234 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 TALDO1P37837 337 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 MNDAP41218 407 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 GNG2P59768 71 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 KLRD1Q13241 179 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 OR1L1Q8NH94 360 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 DIRAS2Q96HU8 199 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 KIRREL1Q96J84 757 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 KCNIP1Q9NZI2 227 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 SESN1Q9Y6P5 492 aa10.35□□□□□ -0.75
SMN1-202ENST00000380707 TRAV40A0A0B4J280 105 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 MEIOCA2RUB1 952 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 FAM172BPA6NC97 362 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 POM121CA8CG34 1229 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 SPINT2O43291 252 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 PITPNAQ00169 270 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 HMGN3Q15651 99 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 LTC4SQ16873 150 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 FAM53AQ6NSI3 398 aaPredicted RBP10.34□□□□□ -0.75
SMN1-202ENST00000380707 TRAT1Q6PIZ9 186 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 MOB1BQ7L9L4 216 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 NANPQ8TBE9 248 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 ABHD1Q96SE0 405 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 TMEM133Q9H2Q1 129 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 IDI2-AS1Q9NZ38 188 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 ADAM30Q9UKF2 790 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 NAV3Q8IVL0 2385 aa10.34□□□□□ -0.75
SMN1-202ENST00000380707 IGKV1D-8A0A087WSZ0 117 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 F2RL2O00254 374 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 DTYMKP23919 212 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 COX7A1P24310 79 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 FPR2P25090 351 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 NFYBP25208 207 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 LOXL3P58215 753 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 ZNF554Q86TJ5 538 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 PNKDQ8N490 385 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 ST6GALNAC5Q9BVH7 336 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 BEX2Q9BXY8 128 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 HEXA-AS1Q9H8Q6 139 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 IGHV3-43A0A0B4J1X8 118 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 A0A1W2PRD5 423 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 A0A1W2PRF3 423 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 A0A1W2PRM7 423 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 MEIS3P1A6NDR6 274 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 TRDCB7Z8K6 153 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 IGHV3-7P01780 117 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 SCTP09683 121 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 IGHV3-43DP0DP04 118 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 HNF1AP20823 631 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 S100A5P33763 92 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 PRSS3P35030 304 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 UBE2E1P51965 193 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 HLA-DRB3P79483 266 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 SRSF7Q16629 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
SMN1-202ENST00000380707 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 OR52W1Q6IF63 320 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 OR10A7Q8NGE5 316 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 OR6Q1Q8NGQ2 317 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 OR13D1Q8NGV5 346 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 LEAP2Q969E1 77 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 GALMQ96C23 342 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 SOSTQ9BQB4 213 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 ZNF286AQ9HBT8 521 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 CDC42EP3Q9UKI2 254 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 MGAT4AQ9UM21 535 aa10.33□□□□□ -0.76
SMN1-202ENST00000380707 A0A087X0M5 115 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 IGHV2-26A0A0B4J1V2 119 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 IGKV1-6A0A0C4DH72 117 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 A0A1B0GX30 115 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 SDCBPO00560 298 aaPredicted RBP10.32□□□□□ -0.76
SMN1-202ENST00000380707 TPPPO94811 219 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 IGHV1-69P01742 117 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 FCER2P06734 321 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 GSTT2P0CG29 244 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 GSTT2BP0CG30 244 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 SRP14P37108 136 aaKnown RBP10.32□□□□□ -0.76
SMN1-202ENST00000380707 RUSC1-AS1Q66K80 236 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 Q6ZS49 121 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 ABHD12Q8N2K0 398 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 OR52M1Q8NGK5 317 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 IL1F10Q8WWZ1 152 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 RAB9BQ9NP90 201 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 OR2S2Q9NQN1 319 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 NUP50Q9UKX7 468 aa10.32□□□□□ -0.76
SMN1-202ENST00000380707 SOX21Q9Y651 276 aaPredicted RBP10.32□□□□□ -0.76
SMN1-202ENST00000380707 FABP12A6NFH5 140 aa10.31□□□□□ -0.76
SMN1-202ENST00000380707 FABP7O15540 132 aa10.31□□□□□ -0.76
SMN1-202ENST00000380707 LPLP06858 475 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms