RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 FAM209BQ5JX69 171 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 CYB561D1Q8N8Q1 229 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
SNX1-202ENST00000380285 IGFBP6P24592 240 aaPredicted RBP8.4□□□□□ -1.07
SNX1-202ENST00000380285 SELENOTP62341 195 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 OTPQ5XKR4 325 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 OR1L8Q8NGR8 309 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 NPVFQ9HCQ7 196 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 AP5S1Q9NUS5 200 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 IGHV1OR21-1A0A087WYE8 117 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 LIMS1P48059 325 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 TNFAIP6P98066 277 aaPredicted RBP8.4□□□□□ -1.07
SNX1-202ENST00000380285 WIPI1Q5MNZ9 446 aaPredicted RBP8.4□□□□□ -1.07
SNX1-202ENST00000380285 TMEM70Q9BUB7 260 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 MS4A7Q9GZW8 240 aaPredicted RBP8.4□□□□□ -1.07
SNX1-202ENST00000380285 OR5AC2Q9NZP5 309 aa8.4□□□□□ -1.07
SNX1-202ENST00000380285 VSIG10L2P0DP72 767 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 TEX30Q5JUR7 227 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 CBLN3Q6UW01 205 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 POLR2AP24928 1970 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 NDUFS8O00217 210 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 ACER2Q5QJU3 275 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 PUSL1Q8N0Z8 303 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 MRGPRDQ8TDS7 321 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 IL17BQ9UHF5 180 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 HSF4Q9ULV5 492 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 CYR61O00622 381 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 MEOX1P50221 254 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 PGLYRP3Q96LB9 341 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 WFIKKN1Q96NZ8 548 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 RASL11BQ9BPW5 248 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 P4HTMQ9NXG6 502 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 IGHV5-51A0A0C4DH38 117 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 MPLP40238 635 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 C1orf100Q5SVJ3 147 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 RSG1Q9BU20 258 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 ZNF646O15015 1829 aaPredicted RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 DIDO1Q9BTC0 2240 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 ORM2P19652 201 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 COMPP49747 757 aaPredicted RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 RBM11P57052 281 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 SRSF9Q13242 221 aaKnown RBP eCLIP8.39□□□□□ -1.07
SNX1-202ENST00000380285 SNRNP40Q96DI7 357 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 MRPL37Q9BZE1 423 aaKnown RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 ERVH48-1M5A8F1 160 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 HPRT1P00492 218 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 CD8AP01732 235 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 ATP5IP56385 69 aaPredicted RBP8.39□□□□□ -1.07
SNX1-202ENST00000380285 LYZP61626 148 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 RPS11P62280 158 aaKnown RBP eCLIP8.39□□□□□ -1.07
SNX1-202ENST00000380285 TSPO2Q5TGU0 170 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 AQP3Q92482 292 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 MRGPRFQ96AM1 343 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 OR2H1Q9GZK4 316 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 R3HDMLQ9H3Y0 253 aa8.39□□□□□ -1.07
SNX1-202ENST00000380285 SYNGR1O43759 233 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 OR2A4O95047 310 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 ZNF880Q6PDB4 577 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 PTPMT1Q8WUK0 201 aaPredicted RBP8.38□□□□□ -1.07
SNX1-202ENST00000380285 OR2A7Q96R45 310 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 YBX2Q9Y2T7 364 aaKnown RBP8.38□□□□□ -1.07
SNX1-202ENST00000380285 CD1BP29016 333 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 SPNS3Q6ZMD2 512 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 Q8WTZ3 238 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GNRHR2Q96P88 292 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 CCL28Q9NRJ3 127 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 LGALS7P47929 136 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 OR4A47Q6IF82 309 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 TNFSF15O95150 251 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 DLX1P56177 255 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GUCA2BQ16661 112 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 OR5R1Q8NH85 324 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 ONECUT1Q9UBC0 465 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 DOCK9Q9BZ29 2069 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 TCF21O43680 179 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 MPZL1O95297 269 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GNG10P50151 68 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 TGIF2LXQ8IUE1 241 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 KCNE5Q9UJ90 142 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 GAGE10A6NGK3 116 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 F5H697 171 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 PRKNO60260 465 aaPredicted RBP8.38□□□□□ -1.07
SNX1-202ENST00000380285 GAMTQ14353 236 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 SVILO95425 2214 aa8.38□□□□□ -1.07
SNX1-202ENST00000380285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 FCGR3AP08637 254 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 PQLC2Q6ZP29 291 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 RBM14Q96PK6 669 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 NPTNQ9Y639 398 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 PATJQ8NI35 1801 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 NPIPB9F8W1W9 429 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms