RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OSR2Q8N2R0 312 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 ZIC4Q8N9L1 334 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 OIT3Q8WWZ8 545 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 PP6455Q8WZ26 134 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 SLC7A10Q9NS82 523 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 LAMP3Q9UQV4 416 aa10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 RBM7Q9Y580 266 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-202ENST00000380281 NSG1A0A0A6YYJ2 146 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 HSPA12AO43301 675 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 IDH3GP51553 393 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 GPM6AP51674 278 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 PSG4Q00888 419 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 MALLQ13021 153 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 TDRG1Q3Y452 100 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 WDR74Q6RFH5 385 aaPredicted RBP10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 ZNF611Q8N823 705 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 CRIM1Q9NZV1 1036 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 A0A1B0GUS0 222 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 ZFP92A6NM28 416 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 ADAM20O43506 726 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 GPR137BO60478 399 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 CEACAM1P13688 526 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 CXCL12P48061 93 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 TNFSF10P50591 281 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 RBX1P62877 108 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 TMEM187Q14656 261 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 ABLIM2Q6H8Q1 611 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 SLC35E3Q7Z769 313 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 OR5C1Q8NGR4 320 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 CDH20Q9HBT6 801 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 GNG13Q9P2W3 67 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 TUBD1Q9UJT1 453 aa10.71□□□□□ -0.69
PRPF40B-202ENST00000380281 BRS3P32247 399 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 SSR4P51571 173 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 ZNF154Q13106 437 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 CLN3Q13286 438 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 C3AR1Q16581 482 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 SPATA46Q5T0L3 261 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 SDSLQ96GA7 329 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 PHF7Q9BWX1 381 aaPredicted RBP10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 CALHM2Q9HA72 323 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 ZNF286AQ9HBT8 521 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 KIAA1456Q9P272 454 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 V9GYS6 101 aa10.71□□□□□ -0.7
PRPF40B-202ENST00000380281 CD82P27701 267 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 S100A7P31151 101 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FGF8P55075 233 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 RNF151Q2KHN1 245 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 C11orf42Q8N5U0 333 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 CADM4Q8NFZ8 388 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FBLN5Q9UBX5 448 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 A0A1B0GW64 132 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 CEACAM18A8MTB9 384 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 HPRT1P00492 218 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 NKX2-1P43699 371 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 EWSR1Q01844 656 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FAM189A2Q15884 450 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 Q6ZPA2 131 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 LIAT1Q6ZQX7 453 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 SGCZQ96LD1 299 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 CCL28Q9NRJ3 127 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FOXJ2Q9P0K8 574 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 FUT9Q9Y231 359 aa10.7□□□□□ -0.7
PRPF40B-202ENST00000380281 A0A1B0GU03 582 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 GDF1P27539 372 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 HOXA4Q00056 320 aaPredicted RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 TMEM267Q0VDI3 215 aaPredicted RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 MPV17LQ2QL34 196 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 LGI3Q8N145 548 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 GAPTQ8N292 157 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 OR56B2PQ8NGI1 322 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 TMEM18Q96B42 140 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 PPYP01298 95 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 CRYABP02511 175 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 IAPPP10997 89 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 LIFP15018 202 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 TCN2P20062 427 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 BCL3P20749 454 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 PCOLCEQ15113 449 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 SPINK14Q6IE38 97 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 LCN15Q6UWW0 184 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 TBC1D26Q86UD7 250 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 ZNF100Q8IYN0 542 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 C22orf15Q8WYQ4 148 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 FOXB1Q99853 325 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 CHRNA10Q9GZZ6 450 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 LRFN1Q9P244 771 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 RIF1Q5UIP0 2472 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 C5orf49A4QMS7 147 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 NPIPB13A6NJU9 1138 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 NPIPB4C9JG80 1138 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 CYB5R3P00387 301 aaPredicted RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 GZMHP20718 246 aa10.69□□□□□ -0.7
PRPF40B-202ENST00000380281 CCL1P22362 96 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms