RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 WNT2P09544 360 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
KIF3A-201ENST00000378735 RTP5Q14D33 572 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 NSDHLQ15738 373 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 TMEM256Q8N2U0 113 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 BORCS8Q96FH0 119 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 ATG2BQ96BY7 2078 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 RP1P56715 2156 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
KIF3A-201ENST00000378735 COL9A1P20849 921 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 WNT5AP41221 380 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 RAB7AP51149 207 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 DLX2Q07687 328 aaPredicted RBP11.73□□□□□ -0.53
KIF3A-201ENST00000378735 POC1BQ8TC44 478 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 NAT6Q93015 286 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 MRGPRX1Q96LB2 322 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 OR51B6Q9H340 312 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 DNAJC4Q9NNZ3 241 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 CCDC163A0A0D9SF12 145 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 MLNRO43193 412 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 DRD1P21728 446 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 LTBRP36941 435 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 SOX8P57073 446 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 PPP1CBP62140 327 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 SELENOTP62341 195 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 PRSS8Q16651 343 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 SLC22A18ASQ8N1D0 253 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 OR13H1Q8NG92 308 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 RNF138Q8WVD3 245 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 RPP25Q9BUL9 199 aaKnown RBP11.73□□□□□ -0.53
KIF3A-201ENST00000378735 VAMP8Q9BV40 100 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 SOHLH2Q9NX45 425 aa11.73□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A10PA6NDY2 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A18PA6NE21 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A16PA6NEW6 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A20PA6NIJ5 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A7PA6NKC0 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A12PA8MX19 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A5PA8MXJ8 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A23PA8MXZ1 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 TCF21O43680 179 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 CTXN2P0C2S0 81 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A15PP0C7V4 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A13PP0C7W8 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A14PP0C7W9 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 FAM90A24PP0C7X0 464 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 HOXB2P14652 356 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 S100GP29377 79 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 RBM11P57052 281 aaKnown RBP11.72□□□□□ -0.53
KIF3A-201ENST00000378735 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
KIF3A-201ENST00000378735 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
KIF3A-201ENST00000378735 SHBQ15464 509 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
KIF3A-201ENST00000378735 TMEM42Q69YG0 159 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 TCRBV21S2A2A0A5A6 115 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 SLC22A20A6NK97 555 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 SYNGR4O95473 234 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 RBX1P62877 108 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 TMEM31Q5JXX7 168 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 C22orf15Q8WYQ4 148 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 WFIKKN1Q96NZ8 548 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 ZNF442Q9H7R0 627 aa11.72□□□□□ -0.53
KIF3A-201ENST00000378735 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 IGKV1D-12P01611 117 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 GCH1P30793 250 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 RPS18P62269 152 aaKnown RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 ORAOV1Q8WV07 137 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 TAF15Q92804 592 aaKnown RBP eCLIP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 LSM10Q969L4 123 aaKnown RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 NEIL1Q96FI4 390 aaPredicted RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 TMEM9BQ9NQ34 198 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 SYNGR2O43760 224 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 MMP23AO75900 390 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 Q6ZWC4 215 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 RPP25LQ8N5L8 163 aaKnown RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 UBE2ZQ9H832 354 aaPredicted RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 CHD3Q12873 2000 aaKnown RBP11.71□□□□□ -0.53
KIF3A-201ENST00000378735 THADAQ6YHU6 1953 aa11.71□□□□□ -0.53
KIF3A-201ENST00000378735 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 A0A0U1RQK1 487 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 ZNF320A2RRD8 509 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 AQP7P3A6NL99 342 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 H3BP45 60 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 IFNL4K9M1U5 179 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 HS3ST1O14792 307 aa11.71□□□□□ -0.54
KIF3A-201ENST00000378735 TMPRSS2O15393 492 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms