RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 STOML3Q8TAV4 291 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 TP53RKQ96S44 253 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 SIRT7Q9NRC8 400 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 FBXL17Q9UF56 701 aa6.9□□□□□ -1.31
CKAP2-203ENST00000378037 PURGQ9UJV8 347 aaKnown RBP6.9□□□□□ -1.31
CKAP2-203ENST00000378037 ANKRD17O75179 2603 aaKnown RBP6.9□□□□□ -1.31
CKAP2-203ENST00000378037 A0A0U1RQV5 110 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 C3orf85A0A1B0GTC6 90 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 MSTNO14793 375 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 MPPED1O15442 326 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SPINT2O43291 252 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 CLDN14O95500 239 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
CKAP2-203ENST00000378037 RPS2P15880 293 aaKnown RBP6.89□□□□□ -1.31
CKAP2-203ENST00000378037 CEACAM21Q3KPI0 293 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 C9orf152Q5JTZ5 239 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 TMEM108Q6UXF1 575 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF818PQ6ZRF7 136 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 AQP3Q92482 292 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 Q96M66 194 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 GPR137Q96N19 417 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 UBTD1Q9HAC8 227 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 S4R3C0 116 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 KIR2DS1A0A191URI9 304 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 UBE2L5PA0A1B0GUS4 154 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 TUBAL3A6NHL2 446 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 MFNGO00587 321 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SMPD2O60906 423 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 IFNA5P01569 189 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 IGHMP01871 453 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 PET100P0DJ07 73 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 KIR2DS4P43632 304 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 TMEM33P57088 247 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 BAXQ07812 192 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 KIR2DS1Q14954 304 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SLC25A53Q5H9E4 307 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 AKR1C8PQ5T2L2 129 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF767PQ75MW2 155 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 TCTE3Q8IZS6 198 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 MDS2Q8NDY4 140 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 OR5C1Q8NGR4 320 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 OR2G3Q8NGZ4 309 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ENY2Q9NPA8 101 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 RPS10P5Q9NQ39 176 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 CLN8Q9UBY8 286 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 BORCS7-ASMTA0A0B4J1R7 106 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 CHST1O43916 411 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 PSPNO60542 156 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SFT2D2O95562 160 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
CKAP2-203ENST00000378037 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 RTP5Q14D33 572 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SMIM21Q3B7S5 101 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 RPL39P5Q59GN2 51 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 SPRNQ5BIV9 151 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 CST9LP1Q5W188 147 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ABLIM2Q6H8Q1 611 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 Q6ZT83 130 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ARRDC1Q8N5I2 433 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 OR5M8Q8NGP6 311 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 OR10X1Q8NGY0 326 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ADGRG7Q96K78 797 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 FANCFQ9NPI8 374 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF355PQ9NSJ1 428 aa6.89□□□□□ -1.31
CKAP2-203ENST00000378037 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 PLAUP00749 431 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 PRB1P04280 392 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 CDKN1AP38936 164 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 LPAR6P43657 344 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ARL6IP1Q15041 203 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 RIPPLY2Q5TAB7 128 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 H2BFWTQ7Z2G1 175 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 STX12Q86Y82 276 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ZNF709Q8N972 641 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 PLPPR1Q8TBJ4 325 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 SOSTQ9BQB4 213 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 DOK5Q9P104 306 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ONECUT1Q9UBC0 465 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 C7orf66A4D0T2 115 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 HSPB2A8KAH6 182 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 GSTZ1O43708 216 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 MMP7P09237 267 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 CCL3L1P16619 93 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 FSTP19883 344 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.311e-8■■■■□ 21.6
CKAP2-203ENST00000378037 CHATP28329 748 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 HSPB2Q16082 182 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 C22orf34Q6ZV56 151 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 BCL2L2Q92843 193 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 ERGIC1Q969X5 290 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 BSCL2Q96G97 398 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 LINC00052Q96N35 136 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 RCC2Q9P258 522 aaKnown RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 DUS4LO95620 317 aaKnown RBP6.88□□□□□ -1.31
CKAP2-203ENST00000378037 CRHP06850 196 aa6.88□□□□□ -1.31
CKAP2-203ENST00000378037 CRYGSP22914 178 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms