RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 OR10G9Q8NGN4 311 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 OR10G7Q8NGN6 311 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 ITLN1Q8WWA0 313 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 DYRK2Q92630 601 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 A0A1B0GU03 582 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 G3V3Q6 166 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 CSRP1P21291 193 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 MRPL14Q6P1L8 145 aaKnown RBP15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF703Q9H7S9 590 aaPredicted RBP15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 IL19Q9UHD0 177 aa15.5■□□□□ 0.07
CLSTN1-202ENST00000377298 EGR4Q05215 589 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 SHISA5Q8N114 240 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 LINC00470Q9BZP3 86 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 COA4Q9NYJ1 87 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 WSB1Q9Y6I7 421 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 CLDN14O95500 239 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 ERVFC1-1P60608 527 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 C1orf100Q5SVJ3 147 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF714Q96N38 554 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 MS4A7Q9GZW8 240 aaPredicted RBP15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 FAM206AQ9NX38 181 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 ZFC3H1O60293 1989 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 J3QW42 95 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 NDUFA2O43678 99 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 SLC25A5P05141 298 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 LURAP1Q96LR2 239 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 CCL13Q99616 98 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 NPIPB9F8W1W9 429 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 RAB29O14966 203 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 GCSAMQ8N6F7 178 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 MRPL24Q96A35 216 aaKnown RBP15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 MRGPRFQ96AM1 343 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF426Q9BUY5 554 aa15.49■□□□□ 0.07
CLSTN1-202ENST00000377298 LCTP09848 1927 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 IGLV3-12A0A075B6K2 115 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 MBPP02686 304 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 TMEM54Q969K7 222 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 ATP5SQ99766 215 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 HDHD3Q9BSH5 251 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 WDR61Q9GZS3 305 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 RNF115Q9Y4L5 304 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 CDK2AP1O14519 115 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 DAOP14920 347 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 PPP1CCP36873 323 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 RNF212Q495C1 297 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF429Q86V71 674 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 TMEM45BQ96B21 275 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 IMMP1LQ96LU5 166 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 VAX1Q5SQQ9 334 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 OR11H7Q8NGC8 314 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 SIGLEC12Q96PQ1 595 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 LPAR5Q9H1C0 372 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 A0A1W2PPQ1 181 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 K7N7A8 449 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 GYPAP02724 150 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF250P15622 560 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 OR1L8Q8NGR8 309 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 SNX22Q96L94 193 aa15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 ALX4Q9H161 411 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 AKIRIN1Q9H9L7 192 aaPredicted RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 SF3B6Q9Y3B4 125 aaKnown RBP15.48■□□□□ 0.07
CLSTN1-202ENST00000377298 GNG7O60262 68 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 HLA-GP17693 338 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 DYNLT3P51808 116 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 LYZP61626 148 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 FABP9Q0Z7S8 132 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 PDZD11Q5EBL8 140 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 PCGF1Q9BSM1 259 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 WNT5BQ9H1J7 359 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 PRR13Q9NZ81 148 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 KLK13Q9UKR3 277 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 PATJQ8NI35 1801 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 TRBV5-7A0A0A0MS05 114 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 MPV17P39210 176 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF260Q3ZCT1 412 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 LINC01590Q5TEZ4 76 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ELOVL5Q9NYP7 299 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 RP1P56715 2156 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 SFTA3P0C7M3 94 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 PAX5Q02548 391 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 C19orf57Q0VDD7 668 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 CD200R1LQ6Q8B3 271 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 Q6ZT83 130 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 TEX29Q8N6K0 151 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 FOXD3Q9UJU5 478 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF320A2RRD8 509 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 LINC00862A6NCI5 91 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 TGFBR3LH3BV60 316 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ORM2P19652 201 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ZNF788Q6ZQV5 615 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 HSD17B13Q7Z5P4 300 aaPredicted RBP15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 ABHD14AQ9BUJ0 271 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 TMUB1Q9BVT8 246 aa15.47■□□□□ 0.07
CLSTN1-202ENST00000377298 RFPL3SP0C7P2 107 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 OR10A7Q8NGE5 316 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 AICDAQ9GZX7 198 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 PPP1R3EQ9H7J1 279 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 OR2H2O95918 312 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 FDX2Q6P4F2 183 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 SAXO1Q8IYX7 474 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms