RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 APELAP0DMC3 54 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MESP1Q9BRJ9 268 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 OBSL1O75147 1896 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 TRGV5A0A0B4J1U4 118 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 FCN1O00602 326 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CDIPTO14735 213 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CHEK1O14757 476 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 PTBP3O95758 552 aaKnown RBP5.67□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF708P17019 499 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 BIVMQ86UB2 503 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 KLHDC3Q9BQ90 382 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 REG4Q9BYZ8 158 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MANBALQ9NQG1 85 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 OR2W1Q9Y3N9 320 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 SCGB2A1O75556 95 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 FOSL1P15407 271 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 DMWDQ09019 674 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 R3HDM4Q96D70 268 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 HES7Q9BYE0 225 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF835Q9Y2P0 537 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 ICE1Q9Y2F5 2266 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 NAAAQ02083 359 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MOB1BQ7L9L4 216 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 RBKSQ9H477 322 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 NAT8BQ9UHF3 227 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 AHCTF1Q8WYP5 2266 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 ACTL6AO96019 429 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM211Q6ICI0 200 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 SPNS3Q6ZMD2 512 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MDP1Q86V88 176 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 ZADH2Q8N4Q0 377 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 TP53RKQ96S44 253 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM222Q9H0R3 208 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 DENND4AQ7Z401 1863 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 A0A0J9YW62 118 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CASP6P55212 293 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 RAC3P60763 192 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 RNPS1Q15287 305 aaKnown RBP5.67□□□□□ -1.5
SMC1A-202ENST00000375340 MARVELD3Q96A59 401 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 C10orf35Q96D05 121 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 Q9N2K0 584 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CT45A6P0DMU7 189 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CT45A5P0DMU8 189 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CT45A7P0DMV0 189 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 NPBWR2P48146 333 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CT45A1Q5HYN5 189 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 OR5B3Q8NH48 314 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 CT45A3Q8NHU0 189 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 RSPO3Q9BXY4 272 aaPredicted RBP5.67□□□□□ -1.5
SMC1A-202ENST00000375340 WBP1LQ9NX94 342 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 IL36RNQ9UBH0 155 aa5.67□□□□□ -1.5
SMC1A-202ENST00000375340 A0A0U1RQV5 110 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SHISA7A6NL88 538 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 ST8SIA5O15466 376 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SEC11BP0C7V7 166 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SLC25A45Q8N413 288 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 A0A0G2JMM0 328 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1W2PPB8 328 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 A0A1W2PRS3 328 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 KIR3DP1A8MWS1 328 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 PKIAP61925 76 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 LYG1Q8N1E2 194 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 OR10A7Q8NGE5 316 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 ZMAT5Q9UDW3 170 aaKnown RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 EFEMP2O95967 443 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SSPNQ14714 243 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TIGITQ495A1 244 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 Q96M66 194 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 VAX2Q9UIW0 290 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TINAGQ9UJW2 476 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TMEM14DPA8MWL7 114 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 IGFBP3P17936 291 aaPredicted RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 PAX6P26367 422 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 COL10A1Q03692 680 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 HFEQ30201 348 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 FDX2Q6P4F2 183 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 Q8IYB0 196 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 VWCEQ96DN2 955 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 CACFD1Q9UGQ2 172 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 CYC1P08574 325 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 BCL2P10415 239 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 BSXQ3C1V8 233 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TPRX1Q8N7U7 411 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SRSF10O75494 262 aaKnown RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 IL2RAP01589 272 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 ACAA1P09110 424 aaPredicted RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 HNRNPA3P51991 378 aaKnown RBP5.66□□□□□ -1.5
SMC1A-202ENST00000375340 BPIFB3P59826 476 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 FAM3AP98173 230 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 ZNF718Q3SXZ3 478 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SLC31A2O15432 143 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 CLPSP04118 112 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 NAT2P11245 290 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 TAS2R45P59539 299 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 SSX7Q7RTT5 188 aa5.66□□□□□ -1.5
SMC1A-202ENST00000375340 CISD2Q8N5K1 135 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms