RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ZNF716A6NP11 495 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 CEBPZOSA8MTT3 80 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 CYC1P08574 325 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 SELLP14151 372 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 MRGPRGQ86SM5 289 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 RNASEH2CQ8TDP1 164 aaKnown RBP18.06■□□□□ 0.48
UPF3A-202ENST00000375299 NEK7Q8TDX7 302 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 HS3ST6Q96QI5 342 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 UBE2ZQ9H832 354 aaPredicted RBP18.06■□□□□ 0.48
UPF3A-202ENST00000375299 A0A1W2PQM1 296 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 HSPB6O14558 160 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 NDUFB7P17568 137 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 FGF7P21781 194 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 S100GP29377 79 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 CLN3Q13286 438 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 WDR25Q64LD2 544 aaPredicted RBP18.06■□□□□ 0.48
UPF3A-202ENST00000375299 ZNF525Q8N782 197 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 C1QTNF5Q9BXJ0 243 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 WDR87Q6ZQQ6 2873 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 CFAP54Q96N23 3096 aa18.06■□□□□ 0.48
UPF3A-202ENST00000375299 LOC102723996A0A087X1L8 192 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 IFNA1P01562 189 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 MDH2P40926 338 aaKnown RBP18.05■□□□□ 0.48
UPF3A-202ENST00000375299 DMRTC2Q8IXT2 367 aaPredicted RBP18.05■□□□□ 0.48
UPF3A-202ENST00000375299 IL36RNQ9UBH0 155 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 PIGBOS1A0A0B4J2F0 54 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 IGHV5-10-1A0A0J9YXX1 117 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 SSR4P51571 173 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 CCL7P80098 99 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 PCSK4Q6UW60 755 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 SAXO1Q8IYX7 474 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 C2orf88Q9BSF0 95 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 SH2D2AQ9NP31 389 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 NAT8Q9UHE5 227 aa18.05■□□□□ 0.48
UPF3A-202ENST00000375299 TNRC6BQ9UPQ9 1833 aaKnown RBP18.05■□□□□ 0.48
UPF3A-202ENST00000375299 IGHV1-45A0A0A0MS14 117 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 ARGFXA6NJG6 315 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 CBR3O75828 277 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 AMBPP02760 352 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 SERPINE2P07093 398 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 GZMBP10144 247 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 PSG2P11465 335 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 SERF2P84101 59 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 ARL16Q0P5N6 197 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 LBHQ53QV2 105 aaPredicted RBP18.04■□□□□ 0.48
UPF3A-202ENST00000375299 OR1P1Q8NH06 330 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 OR51H1Q8NH63 302 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 PRDM14Q9GZV8 571 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 FGF23Q9GZV9 251 aaPredicted RBP18.04■□□□□ 0.48
UPF3A-202ENST00000375299 CHD3Q12873 2000 aaKnown RBP18.04■□□□□ 0.48
UPF3A-202ENST00000375299 METTL15P1P0C7V9 234 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 COL10A1Q03692 680 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 PRDX4Q13162 271 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 IZUMO4Q1ZYL8 232 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 LRRC75BQ2VPJ9 315 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 TMEM41BQ5BJD5 291 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 NCR3LG1Q68D85 454 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 OR56B2PQ8NGI1 322 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 CCDC74BQ96LY2 380 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 PYGO2Q9BRQ0 406 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 RBKSQ9H477 322 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 GAB2Q9UQC2 676 aa18.04■□□□□ 0.48
UPF3A-202ENST00000375299 LY6G6EA0A0G2JKS1 128 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 MAP1LC3B2A6NCE7 125 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 SYNGR2O43760 224 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 PFN1P07737 140 aaKnown RBP18.03■□□□□ 0.48
UPF3A-202ENST00000375299 MMP7P09237 267 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-202ENST00000375299 IAPPP10997 89 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 CARD18P57730 90 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 B3GALT5-AS1P59052 145 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 ADIRFQ15847 76 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 Q6ZRM9 215 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 C16orf82Q7Z2V1 217 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 AGMATQ9BSE5 352 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 MAP1LC3BQ9GZQ8 125 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 GPR35Q9HC97 309 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 PSENENQ9NZ42 101 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 U3KQA8 63 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 CD55P08174 381 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 ABLIM2Q6H8Q1 611 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 MRPL30Q8TCC3 161 aaKnown RBP18.03■□□□□ 0.48
UPF3A-202ENST00000375299 IMMP1LQ96LU5 166 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 ACTR3CQ9C0K3 210 aaPredicted RBP18.03■□□□□ 0.48
UPF3A-202ENST00000375299 CACNG5Q9UF02 275 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 OR2W1Q9Y3N9 320 aa18.03■□□□□ 0.48
UPF3A-202ENST00000375299 GPM6AP51674 278 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 RIPPLY2Q5TAB7 128 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 ZNF324BQ6AW86 544 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-202ENST00000375299 CYP2G1PQ6ZSU1 146 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 HAPLN4Q86UW8 402 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 SMIM7Q9BQ49 75 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 PLK3Q9H4B4 646 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 MTCH1Q9NZJ7 389 aa18.02■□□□□ 0.48
UPF3A-202ENST00000375299 K7ESF4 209 aa18.02■□□□□ 0.47
UPF3A-202ENST00000375299 YRDCQ86U90 279 aaKnown RBP18.02■□□□□ 0.47
UPF3A-202ENST00000375299 GGNQ86UU5 652 aa18.02■□□□□ 0.47
UPF3A-202ENST00000375299 LILRB2Q8N423 598 aa18.02■□□□□ 0.47
UPF3A-202ENST00000375299 CPEB3Q8NE35 698 aaKnown RBP18.02■□□□□ 0.47
UPF3A-202ENST00000375299 PINX1Q96BK5 328 aaKnown RBP18.02■□□□□ 0.47
UPF3A-202ENST00000375299 MISP3Q96FF7 219 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms