RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 IGHV1-45A0A0A0MS14 117 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 A0A0J9YW62 118 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 CEBPZOSA8MTT3 80 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 C21orf140B9A014 251 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 TM4SF5O14894 197 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PAX9P55771 341 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-203ENST00000374877 GPR137CQ8N3F9 429 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 NECAP1Q8NC96 275 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 OR51H1Q8NH63 302 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PLPPR1Q8TBJ4 325 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 ABHD14BQ96IU4 210 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 GPR87Q9BY21 358 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PLSCR2Q9NRY7 297 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 GAB2Q9UQC2 676 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 SLC31A2O15432 143 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 CCL3P10147 92 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 SELLP14151 372 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 UCP1P25874 307 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-203ENST00000374877 TMEM42Q69YG0 159 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 H1FOOQ8IZA3 346 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-203ENST00000374877 IMMP1LQ96LU5 166 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 IL36GQ9NZH8 169 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 FOXJ2Q9P0K8 574 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 TAAR3PQ9P1P4 343 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 hCG_38984A0A1B0GV85 526 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 SPAARA0A1B0GVQ0 90 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 COX6A1P12074 109 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PSG4Q00888 419 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 ADIRFQ15847 76 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 WDR25Q64LD2 544 aaPredicted RBP9.49□□□□□ -0.89
CCDC40-203ENST00000374877 IGF2-ASQ6U949 168 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 PITPNC1Q9UKF7 332 aa9.49□□□□□ -0.89
CCDC40-203ENST00000374877 A0A0G2JRQ6 117 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF816-ZNF321PA0A0X1KG74 233 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 IAPPP10997 89 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 RND2P52198 227 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 HNF4GQ14541 408 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 SSPNQ14714 243 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 HERPUD1Q15011 391 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 SSX2Q16385 188 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 SDF2L1Q9HCN8 221 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 TMEM38BQ9NVV0 291 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CISD1Q9NZ45 108 aaKnown RBP9.48□□□□□ -0.89
CCDC40-203ENST00000374877 RNF115Q9Y4L5 304 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 TNFSF15O95150 251 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 IFNA10P01566 189 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OPN1MWP04001 364 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OPN1MW2P0DN77 364 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OPN1MW3P0DN78 364 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 BCL3P20749 454 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CD81P60033 236 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CLN3Q13286 438 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 DAZAP2Q15038 168 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 FGFBP3Q8TAT2 258 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 Q9N2K0 584 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 IL36RNQ9UBH0 155 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF705GA8MUZ8 300 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-203ENST00000374877 TGOLN2O43493 480 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 SERPINE2P07093 398 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CST2P09228 141 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 METTL15P1P0C7V9 234 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 CCNOP22674 350 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 ELLP55199 621 aaPredicted RBP9.48□□□□□ -0.89
CCDC40-203ENST00000374877 TAS2R60P59551 318 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OR10A7Q8NGE5 316 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OR10G4Q8NGN3 311 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 OR4X1Q8NH49 305 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 HS3ST6Q96QI5 342 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 PLK3Q9H4B4 646 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 WDFY3Q8IZQ1 3526 aa9.48□□□□□ -0.89
CCDC40-203ENST00000374877 DUXBA0A1W2PPF3 345 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 ZIC3O60481 467 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CNOT4O95628 575 aaKnown RBP9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CD55P08174 381 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 NTF4P34130 210 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 OR8G1Q15617 311 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 SSX7Q7RTT5 188 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 OR2V1Q8NHB1 315 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CA5BP1Q8WTZ4 195 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 MISP3Q96FF7 219 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 TRBV24-1A0A075B6N3 115 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 TRAV1-1A0A0B4J248 108 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CLEC18AA5D8T8 446 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 OR6C6A6NF89 314 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 PGLYRP1O75594 196 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-203ENST00000374877 LIFP15018 202 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 DSCR4P56555 118 aaPredicted RBP9.47□□□□□ -0.89
CCDC40-203ENST00000374877 FOXO1Q12778 655 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 ZNF726P1Q15940 193 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CEACAM16Q2WEN9 425 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 AAED1Q7RTV5 226 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms