RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 OR52M1Q8NGK5 317 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 MALSU1Q96EH3 234 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 ABHD14BQ96IU4 210 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 KCNJ16Q9NPI9 418 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 RCL1Q9Y2P8 373 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 UMAD1C9J7I0 102 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 K7N7A8 449 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 M0R036 132 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 PRRG2O14669 202 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 ZNF266Q14584 549 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 CLEC9AQ6UXN8 241 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 C1orf162Q8NEQ5 155 aaPredicted RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 BOD1Q96IK1 185 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 SPIN2AQ99865 258 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 SPIN2BQ9BPZ2 258 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 PAPOLGQ9BWT3 736 aaKnown RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 TINAGQ9UJW2 476 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 RAB5AP20339 215 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 FUT3P21217 361 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 AADACP22760 399 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 TIMP3P35625 211 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 AKR1C3P42330 323 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 RBM11P57052 281 aaKnown RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 EWSR1Q01844 656 aaKnown RBP eCLIP11.29□□□□□ -0.6
A1CF-204ENST00000373997 Q6ZS49 121 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 LILRB1Q8NHL6 650 aaPredicted RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
A1CF-204ENST00000373997 C11orf1Q9H5F2 150 aa11.29□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A8PA6NJQ4 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A22PA8MWA6 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A12PA8MX19 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A5PA8MXJ8 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 TRDCB7Z8K6 153 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 MPPED1O15442 326 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 PPYP01298 95 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A15PP0C7V4 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A13PP0C7W8 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A14PP0C7W9 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 FAM90A24PP0C7X0 464 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 GLI4P10075 376 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 MAS1LP35410 378 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 NHLH2Q02577 135 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
A1CF-204ENST00000373997 BEND4Q6ZU67 534 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 DOLPP1Q86YN1 238 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 SLC35G3Q8N808 338 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 HSD17B11Q8NBQ5 300 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 DYRK2Q92630 601 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
A1CF-204ENST00000373997 C3orf85A0A1B0GTC6 90 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 PITX3O75364 302 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 FHITP49789 147 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 RND3P61587 244 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 CLINT1Q14677 625 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 UNQ6494/PRO21346Q6UXR6 183 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 Q8NFD4 153 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 OR11L1Q8NGX0 322 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 TMEM56Q96MV1 263 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 UNKLQ9H9P5 680 aaKnown RBP11.27□□□□□ -0.6
A1CF-204ENST00000373997 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.6
A1CF-204ENST00000373997 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 FAM221AA4D161 298 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 A6NLC8 198 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 ZNF205O95201 554 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 CEACAM8P31997 349 aaPredicted RBP11.27□□□□□ -0.61
A1CF-204ENST00000373997 SULT1A1P50225 295 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 PRDX4Q13162 271 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 MRPL49Q13405 166 aaKnown RBP11.27□□□□□ -0.61
A1CF-204ENST00000373997 P2RY6Q15077 328 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
A1CF-204ENST00000373997 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 TP53RKQ96S44 253 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 ZNF442Q9H7R0 627 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
A1CF-204ENST00000373997 ZZEF1O43149 2961 aa11.27□□□□□ -0.61
A1CF-204ENST00000373997 SHANK1Q9Y566 2161 aa11.26□□□□□ -0.61
A1CF-204ENST00000373997 SMPD2O60906 423 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms