RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NKX6-1P78426 367 aaPredicted RBP9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 DLK1P80370 383 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM211Q6ICI0 200 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 Q6ZS49 121 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 LHFPL2Q6ZUX7 228 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF429Q86V71 674 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST3H2BBQ8N257 126 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 OR52M1Q8NGK5 317 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 OR5D18Q8NGL1 313 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 OR10D3Q8NH80 312 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 OR5R1Q8NH85 324 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 OR2V1Q8NHB1 315 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 Q8WTZ3 238 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 SPTSSAQ969W0 71 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM56Q96MV1 263 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 RARRES2Q99969 163 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 LIME1Q9H400 295 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 PRDM13Q9H4Q3 707 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 ELL3Q9HB65 397 aaPredicted RBP9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF391Q9UJN7 358 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM56-RWDD3S4R434 201 aa9.81□□□□□ -0.84
TSPAN1-201ENST00000372003 CCL21O00585 134 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 MSTNO14793 375 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 WDR1O75083 606 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 PAX1P15863 534 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 FAHP16930 419 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 CA7P43166 264 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 NKX2-1P43699 371 aaPredicted RBP9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 ENDOGQ14249 297 aaKnown RBP9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 ICAM4Q14773 271 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 SP6Q3SY56 376 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 Q3ZCU0 254 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM252Q8N6L7 170 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 RNASE11Q8TAA1 199 aaKnown RBP9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 IL22RA2Q969J5 263 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 TOMM40LQ969M1 308 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 TECTBQ96PL2 329 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 WSB1Q9Y6I7 421 aa9.8□□□□□ -0.84
TSPAN1-201ENST00000372003 IGHV3-15A0A0B4J1V0 119 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 C3orf85A0A1B0GTC6 90 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 OR5H1A6NKK0 313 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 E9PLN8 166 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 TSTD3H0UI37 97 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 J3QKU1 62 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 MPPED1O15442 326 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 PHF1O43189 567 aaPredicted RBP9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 RAMP1O60894 148 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 NDUFS6O75380 124 aaKnown RBP9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 VAMP5O95183 116 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 HERV-K104P61576 105 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 VAMP2P63027 116 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 HLA-DRB3P79483 266 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 IL24Q13007 206 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 C1orf185Q5T7R7 199 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 CLEC9AQ6UXN8 241 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 ZNF100Q8IYN0 542 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 C1orf87Q8N0U7 546 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 SLC35G3Q8N808 338 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 CLDND2Q8NHS1 167 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 ADGRG7Q96K78 797 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 FAAP24Q9BTP7 215 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 SRXN1Q9BYN0 137 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 PRRG4Q9BZD6 226 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 CTDSP1Q9GZU7 261 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 TMEM222Q9H0R3 208 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM215AQ9Y5M1 114 aa9.79□□□□□ -0.84
TSPAN1-201ENST00000372003 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A10PA6NDY2 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A8PA6NJQ4 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A7PA6NKC0 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A22PA8MWA6 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 M0R135 149 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 DFFBO76075 338 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 SYNGR4O95473 234 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 CXCL1P09341 107 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 CEACAM6P40199 344 aa9.78□□□□□ -0.84
TSPAN1-201ENST00000372003 RAB4BP61018 213 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms