RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 TMEM92Q6UXU6 159 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 Q6ZVH6 145 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 OR2J1Q9GZK6 312 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 CCL25O15444 150 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 MDH2P40926 338 aaKnown RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 GRB2P62993 217 aaKnown RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 ACSM6Q6P461 480 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 PARM1Q6UWI2 310 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 MRGPRGQ86SM5 289 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF501Q96CX3 271 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 ABHD14BQ96IU4 210 aa9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 FGF23Q9GZV9 251 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF737O75373 536 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 C20orf204Q6ZNR8 217 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 RPUSD4Q96CM3 377 aaKnown RBP9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 MIEN1Q9BRT3 115 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 CRIM1Q9NZV1 1036 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 POLR1DQ9Y2S0 133 aa9.96□□□□□ -0.82
SMARCA1-201ENST00000371121 TNRC6BQ9UPQ9 1833 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TUSC2O75896 110 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 CRYGSP22914 178 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 NTSR1P30989 418 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 CTRLP40313 264 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 LRRC75BQ2VPJ9 315 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 SHISA6Q6ZSJ9 500 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ASXL3Q9C0F0 2248 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 B4DGG1 531 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TNFSF13O75888 250 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 VDAC1P21796 283 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 NTF4P34130 210 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TRIP6Q15654 476 aaKnown RBP9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 NSDHLQ15738 373 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ACSF3Q4G176 576 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM42Q69YG0 159 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ZDHHC23Q8IYP9 409 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 THAP3Q8WTV1 239 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF286AQ9HBT8 521 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF160Q9HCG1 818 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 CCL28Q9NRJ3 127 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 IL36RNQ9UBH0 155 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 NCKAP5O14513 1909 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 GRIFINA4D1Z8 144 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 PIAS2O75928 621 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 TCN2P20062 427 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 SLC25A53Q5H9E4 307 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF705AQ6ZN79 300 aaPredicted RBP9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ZNF695Q8IW36 515 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 STPG4Q8N801 248 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 DDIT4LQ96D03 193 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 LRRC61Q9BV99 259 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 ST3GAL6Q9Y274 331 aa9.95□□□□□ -0.82
SMARCA1-201ENST00000371121 PGPEP1LA6NFU8 196 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 EPHA8P29322 1005 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 OR10J1P30954 320 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 ADMP35318 185 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 LHX2P50458 406 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 CISD2Q8N5K1 135 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM106BQ9NUM4 274 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 MRPL52Q86TS9 123 aaKnown RBP9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 Q8N7P7 452 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 PSMG3Q9BT73 122 aaPredicted RBP9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 MANBALQ9NQG1 85 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 SPTY2D1-AS1A0A0U1RR47 76 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 HOXB2P14652 356 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 CFHR1Q03591 330 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 OR1K1Q8NGR3 316 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 OR2T10Q8NGZ9 312 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 IL22RA2Q969J5 263 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 OBP2AQ9NY56 170 aa9.94□□□□□ -0.82
SMARCA1-201ENST00000371121 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 NAPSAO96009 420 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 TNFP01375 233 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 IGKV1-5P01602 117 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 THEGLP0DJG4 465 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 NUFIP2Q7Z417 695 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 MRPL30Q8TCC3 161 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 WDR61Q9GZS3 305 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 ZFP30Q9Y2G7 519 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 TMEM150CB9EJG8 249 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 H7BYZ3 331 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 TCF21O43680 179 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 GYPAP02724 150 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 EGR1P18146 543 aa9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 IDH3GP51553 393 aaPredicted RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 RBM11P57052 281 aaKnown RBP9.93□□□□□ -0.82
SMARCA1-201ENST00000371121 YPEL5P62699 121 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms