RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 KCNS1Q96KK3 526 aa13.76□□□□□ -0.21
PHACTR3-204ENST00000371015 TET1Q8NFU7 2136 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SERINC4A6NH21 518 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 G3V3Y1 287 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SH2D1BO14796 132 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 FOXL2P58012 376 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 CKS1BP61024 79 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 PRDX1Q06830 199 aaKnown RBP13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 ZP4Q12836 540 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 TAAR6Q96RI8 345 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SPTBP11277 2137 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 TRAV26-1A0A087WT03 109 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 CRYGCP07315 174 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 ASAH2BP0C7U1 165 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 C3orf79P0CE67 100 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 EIF3IQ13347 325 aaKnown RBP13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SP6Q3SY56 376 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 BVES-AS1Q5T3Y7 98 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 RNF44Q7L0R7 432 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SGMS2Q8NHU3 365 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 NEIL1Q96FI4 390 aaPredicted RBP13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 C1orf147Q96MC9 270 aaPredicted RBP13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 MRPL18Q9H0U6 180 aaKnown RBP13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 SLC39A9Q9NUM3 307 aa13.75□□□□□ -0.21
PHACTR3-204ENST00000371015 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 DOCK9Q9BZ29 2069 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 HAND1O96004 215 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 CEBPDP49716 269 aaPredicted RBP13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 UFSP1Q6NVU6 142 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 PLPPR1Q8TBJ4 325 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 LHX4Q969G2 390 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 PLAGL1Q9UM63 463 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 LINC01553A4QN01 128 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 CST7O76096 145 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 MT-ND6P03923 174 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 HLA-DRB5Q30154 266 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 ASCL4Q6XD76 172 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 ST20Q9HBF5 79 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 NECAP2Q9NVZ3 263 aa13.74□□□□□ -0.21
PHACTR3-204ENST00000371015 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 SLC35E2P0CK97 266 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 DUSP3P51452 185 aaPredicted RBP13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 ID3Q02535 119 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 ELAVL3Q14576 367 aaKnown RBP13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 HLA-BQ31612 363 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 WDR82Q6UXN9 313 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 FAM58AQ8N1B3 248 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 NINJ1Q92982 152 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 IRF7Q92985 503 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 TM2D1Q9BX74 207 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 STRADBQ9C0K7 418 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 GPR27Q9NS67 375 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 ZNF324O75467 553 aaPredicted RBP13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 CTSSP25774 331 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 EMDP50402 254 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 POM121L1PQ3SYA9 428 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 MPV17L2Q567V2 206 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 PHYHD1Q5SRE7 291 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 VN1R2Q8NFZ6 395 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 CYB5D2Q8WUJ1 264 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 MMP25Q9NPA2 562 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 PPP1R3CQ9UQK1 317 aa13.73□□□□□ -0.21
PHACTR3-204ENST00000371015 FOXI3A8MTJ6 420 aaPredicted RBP13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 H0YJW9 148 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 SSSCA1O60232 199 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 NKX2-2O95096 273 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 GPR1P46091 355 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 TMEM215Q68D42 235 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 RTN4RL2Q86UN3 420 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 ANXA10Q9UJ72 324 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 WASHC3Q9Y3C0 194 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 ALG1L2C9J202 215 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 H7C1C5 153 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 TNFP01375 233 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 CPMP14384 443 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 OPRM1P35372 400 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 ZNF141Q15928 474 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 PECRQ9BY49 303 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
PHACTR3-204ENST00000371015 VSTM5A8MXK1 200 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 C4orf51C9J302 202 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 MPPED1O15442 326 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 HLA-DRB1P01911 266 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 LINC00869P0C866 280 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 ZNF776Q68DI1 518 aaPredicted RBP13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 MRPL21Q7Z2W9 205 aaKnown RBP13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 ZNF547Q8IVP9 402 aa13.71□□□□□ -0.21
PHACTR3-204ENST00000371015 OR51T1Q8NGJ9 327 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms