RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 Q6ZRM9 215 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 PLXDC1Q8IUK5 500 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 OR5R1Q8NH85 324 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 RCC1LQ96I51 464 aaKnown RBP10.54□□□□□ -0.72
PHGDH-201ENST00000369407 RASL10BQ96S79 203 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 SMIM7Q9BQ49 75 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 CDH20Q9HBT6 801 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 TK1P04183 234 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF32P17041 273 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 BMP5P22003 454 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 CCNOP22674 350 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 OR3A1P47881 315 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 IDH3GP51553 393 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-201ENST00000369407 SLC25A53Q5H9E4 307 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 SCGB1C1Q8TD33 95 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 TUBG2Q9NRH3 451 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 DKKL1Q9UK85 242 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 RNF115Q9Y4L5 304 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
PHGDH-201ENST00000369407 SELEP16581 610 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 VDAC1P21796 283 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 GNB2P62879 340 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 H3F3AP84243 136 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
PHGDH-201ENST00000369407 GPR146Q96CH1 333 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 CRIM1Q9NZV1 1036 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 B4DEV8 164 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 MKRN2OSH3BPM6 223 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 ETV2O00321 342 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-201ENST00000369407 DUX1O43812 170 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 GDF9O60383 454 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 RPLP1P05386 114 aaKnown RBP10.53□□□□□ -0.72
PHGDH-201ENST00000369407 DEFA4P12838 97 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 BCL3P20749 454 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 MSX1P28360 303 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 PAX5Q02548 391 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 LHFPL2Q6ZUX7 228 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 ADPRHL1Q8NDY3 354 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 OR6C1Q96RD1 312 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 CISD1Q9NZ45 108 aaKnown RBP10.53□□□□□ -0.72
PHGDH-201ENST00000369407 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 OPN1MWP04001 364 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 OPN1MW2P0DN77 364 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 OPN1MW3P0DN78 364 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 PSG2P11465 335 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 CCL2P13500 99 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-201ENST00000369407 IL24Q13007 206 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 HLA-BQ31612 363 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 TEX38Q6PEX7 206 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 ZIC4Q8N9L1 334 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 OR1F12Q8NHA8 337 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 DEFB126Q9BYW3 111 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 TCFL5Q9UL49 500 aa10.53□□□□□ -0.72
PHGDH-201ENST00000369407 LRRC3CA6NJW4 275 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 DVL1O14640 695 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 ZFAND5O76080 213 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 CRYGSP22914 178 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 SRPXP78539 464 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 IGFBP7Q16270 282 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 SLC23A3Q6PIS1 610 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 C17orf82Q86X59 251 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-201ENST00000369407 H1FOOQ8IZA3 346 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-201ENST00000369407 NOL4LQ96MY1 436 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-201ENST00000369407 IGHV1OR15-9A0A0B4J2B8 117 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 SYNGR3O43761 229 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 DFFBO76075 338 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 WNT5AP41221 380 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 GALR1P47211 349 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 MLF1P58340 268 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 BAXQ07812 192 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 AARDQ4LEZ3 155 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 C10orf128Q5T292 105 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 TMEM211Q6ICI0 200 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 WDR5BQ86VZ2 330 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 SPACA9Q96E40 222 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-201ENST00000369407 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 DNAJC4Q9NNZ3 241 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 PRSS50Q9UI38 385 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 NBEAQ8NFP9 2946 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 EXPH5Q8NEV8 1989 aa10.52□□□□□ -0.73
PHGDH-201ENST00000369407 A0A1W2PR77 199 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 MAP1LC3B2A6NCE7 125 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 C10orf142B7Z368 130 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 ZNF737O75373 536 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 PGLYRP1O75594 196 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-201ENST00000369407 CEACAM1P13688 526 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 HIST1H3AP68431 136 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 OR5L2Q8NGL0 311 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 ZNF488Q96MN9 340 aa10.51□□□□□ -0.73
PHGDH-201ENST00000369407 MAP1LC3BQ9GZQ8 125 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms