RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 MITD1Q8WV92 249 aa9.27□□□□□ -0.92
PTPRK-205ENST00000368213 WDR61Q9GZS3 305 aaKnown RBP9.27□□□□□ -0.92
PTPRK-205ENST00000368213 MTFP1Q9UDX5 166 aa9.27□□□□□ -0.92
PTPRK-205ENST00000368213 A0A0A6YYJ9 748 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 C17orf51A8MQB3 221 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 TXNDC12O95881 172 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 PPYP01298 95 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 MMP7P09237 267 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-205ENST00000368213 M6PRP20645 277 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 RPL27AP46776 148 aaKnown RBP9.27□□□□□ -0.93
PTPRK-205ENST00000368213 ZNF90Q03938 601 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 NCR3LG1Q68D85 454 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 LAMTOR1Q6IAA8 161 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 BTNL8Q6UX41 500 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 BVESQ8NE79 360 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 SSC4DQ8WTU2 575 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 PPP1R1CQ8WVI7 109 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 VSIG4Q9Y279 399 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 KLHDC2Q9Y2U9 406 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 ZIC3O60481 467 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 TMED6Q8WW62 240 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 CNOT1A5YKK6 2376 aaKnown RBP9.27□□□□□ -0.93
PTPRK-205ENST00000368213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.27□□□□□ -0.93
PTPRK-205ENST00000368213 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 PLAC9Q5JTB6 97 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 AUP1Q9Y679 476 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 ZNF727A8MUV8 499 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 G6PCP35575 357 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 SNAI3Q3KNW1 292 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 FAM219AQ8IW50 185 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 PRSS33Q8NF86 280 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 SH2D2AQ9NP31 389 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 KCNE5Q9UJ90 142 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 OR51B2Q9Y5P1 312 aa9.27□□□□□ -0.93
PTPRK-205ENST00000368213 OR2J3O76001 311 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 CPN1P15169 458 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 CRYBB2P43320 205 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 ZNRF4Q8WWF5 429 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 ITPKCQ96DU7 683 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 PKIBQ9C010 78 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 CALYQ9NYX4 217 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 THADAQ6YHU6 1953 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 SLC31A2O15432 143 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 IGHV1-2P23083 117 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 NBL1P41271 181 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 THSD7BQ9C0I4 1608 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 ODAMA1E959 279 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 KRBOX1C9JBD0 128 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 J3QR06 171 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 FAM106AQ4KMX7 169 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 OR1L6Q8NGR2 347 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 GPA33Q99795 319 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 MRPS18CQ9Y3D5 142 aaKnown RBP9.26□□□□□ -0.93
PTPRK-205ENST00000368213 V9GYS6 101 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 CTSDP07339 412 aaPredicted RBP9.26□□□□□ -0.93
PTPRK-205ENST00000368213 GGNBP1Q5YKI7 109 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 EBLN2Q6P2I7 272 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 OR9G1Q8NH87 305 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 DTD1Q8TEA8 209 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 MEGF10Q96KG7 1140 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 RNF2Q99496 336 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 PCM1Q15154 2024 aa9.26□□□□□ -0.93
PTPRK-205ENST00000368213 J3QW42 95 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 SLC25A53Q5H9E4 307 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 OR1L1Q8NH94 360 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 PCNPQ8WW12 178 aaKnown RBP9.25□□□□□ -0.93
PTPRK-205ENST00000368213 TUBA4BQ9H853 241 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 LHFPL6Q9Y693 200 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 GVINP1Q7Z2Y8 2422 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 KLF7O75840 302 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-205ENST00000368213 RPUSD3Q6P087 351 aaKnown RBP9.25□□□□□ -0.93
PTPRK-205ENST00000368213 MS4A10Q96PG2 267 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 ARID2Q68CP9 1835 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 A0A1W2PS18 150 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 OR4C13Q8NGP0 309 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 C14orf79Q96F83 325 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 TLNRD1Q9H1K6 362 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 H7BYZ3 331 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 C1QCP02747 245 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 VSIG8P0DPA2 414 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 OR4X2Q8NGF9 303 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 PGLYRP3Q96LB9 341 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 GPX7Q96SL4 187 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-205ENST00000368213 CABLES2Q9BTV7 478 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 GAB2Q9UQC2 676 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 IGLV1-36A0A0B4J1U3 117 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 S100A8P05109 93 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 GALR1P47211 349 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 PAX5Q02548 391 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 GLDNQ6ZMI3 551 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-205ENST00000368213 PDPNQ86YL7 162 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 CALHM1Q8IU99 346 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 ST6GALNAC3Q8NDV1 305 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 Q9N2K0 584 aa9.25□□□□□ -0.93
PTPRK-205ENST00000368213 TGFBR3LH3BV60 316 aa9.24□□□□□ -0.93
PTPRK-205ENST00000368213 ADAM10O14672 748 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms