RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 GUCD1Q96NT3 240 aa9.81□□□□□ -0.84
CDC42BPA-205ENST00000366769 TMPRSS11DO60235 418 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 NPSP0C0P6 89 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF83P51522 516 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TMEM136Q6ZRR5 245 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 PDLIM7Q9NR12 457 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 SLC17A5Q9NRA2 495 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 SLC7A10Q9NS82 523 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 LSM6P62312 80 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 CLLU1OSQ5K130 101 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 SLC26A1Q9H2B4 701 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 FAM78AQ5JUQ0 283 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TCFL5Q9UL49 500 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 FIGNL2A6NMB9 653 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 PFN3P60673 137 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 IL17CQ9P0M4 197 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TIMM10BQ9Y5J6 103 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 ACTL6AO96019 429 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 BCL3P20749 454 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 VMA21Q3ZAQ7 101 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 SYS1Q8N2H4 156 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF740Q8NDX6 193 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TBL2Q9Y4P3 447 aaKnown RBP9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 RUNX1Q01196 453 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR10S1Q8NGN2 331 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 KISS1RQ969F8 398 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 CCSMST1Q4G0I0 132 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 KCNE5Q9UJ90 142 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 COL22A1Q8NFW1 1626 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TLCD2A6NGC4 264 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 CST5P28325 142 aaPredicted RBP9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 TM4SF1P30408 202 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 DOLPP1Q86YN1 238 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 FAM169BQ8N8A8 192 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF519Q8TB69 540 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 IGHA2P01877 340 aa9.8□□□□□ -0.84
CDC42BPA-205ENST00000366769 KLF3P57682 345 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 MRPL24Q96A35 216 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 MRGPRX4Q96LA9 322 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 SPCS1Q9Y6A9 102 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PLXNB3Q9ULL4 1909 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 TRAV39A0A0B4J263 110 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 SLCO2B1O94956 709 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 CYC1P08574 325 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 EFNB2P52799 333 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 RPL27P61353 136 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 LYG1Q8N1E2 194 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 Q8WTZ3 238 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 CHRNA10Q9GZZ6 450 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 NKX2-6A6NCS4 301 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 DLEU1O43261 78 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF205O95201 554 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 C1SP09871 688 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 CA11O75493 328 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 SP1P08047 785 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 LILRA3Q8N6C8 439 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF346Q9UL40 294 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 ST3GAL6Q9Y274 331 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 MKRN2OSH3BPM6 223 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 NDUFB3O43676 98 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PDCD1Q15116 288 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR10G4Q8NGN3 311 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR10G9Q8NGN4 311 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR10G7Q8NGN6 311 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR4S2Q8NH73 311 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 AGRNO00468 2067 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OBSL1O75147 1896 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PLAUP00749 431 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 APELAP0DMC3 54 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR10W1Q8NGF6 305 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PBOV1Q9GZY1 135 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 FCGR3BO75015 233 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PITX3O75364 302 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 MRPS21P82921 87 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 IL24Q13007 206 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 DUSP8Q13202 625 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 COL10A1Q03692 680 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 RPL18Q07020 188 aaKnown RBP9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 PHOSPHO2Q8TCD6 241 aa9.79□□□□□ -0.84
CDC42BPA-205ENST00000366769 IGKV3D-11A0A0A0MRZ8 115 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 OR3A4PP47883 348 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 MESTQ5EB52 335 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 CITED2Q99967 270 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 PLXNA1Q9UIW2 1896 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 MMDQ15546 238 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 PRSS8Q16651 343 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 TMEM91Q6ZNR0 172 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF502Q8TBZ5 544 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 A0A1B0GX78 115 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 PLPP2O43688 288 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 PRKNO60260 465 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 ETHE1O95571 254 aa9.78□□□□□ -0.84
CDC42BPA-205ENST00000366769 ZNF121P58317 390 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms