RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PRB2P02812 416 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 GAPDHP04406 335 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CDK1P06493 297 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MGMTP16455 207 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TMEM11P17152 192 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 INSL4Q14641 139 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SYT6Q5T7P8 510 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 AWAT2Q6E213 333 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 RAB12Q6IQ22 244 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 Q6ZPA2 131 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SLC25A48Q6ZT89 311 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IZUMO1Q8IYV9 350 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NKAIN3Q8N8D7 197 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 THRSPQ92748 146 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 BANF2Q9H503 90 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 DCLRE1BQ9H816 532 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PLSCR3Q9NRY6 295 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MBNL3Q9NUK0 354 aaKnown RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NKX1-2Q9UD57 310 aaPredicted RBP10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ERGIC3Q9Y282 383 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PEX16Q9Y5Y5 336 aa10.82□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGHV3-43A0A0B4J1X8 118 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CCRL2O00421 344 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SLC31A2O15432 143 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CA11O75493 328 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGHV3-43DP0DP04 118 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 RCC1P18754 421 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 FUT3P21217 361 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MAPK3P27361 379 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 VHLP40337 213 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IRF3Q14653 427 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TMEM30BQ3MIR4 351 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CT45A1Q5HYN5 189 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C6orf141Q5SZD1 244 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 REC114Q7Z4M0 266 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 LRRTM1Q86UE6 522 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MS4A15Q8N5U1 240 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 OR4X2Q8NGF9 303 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 OR4K15Q8NH41 348 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CT45A3Q8NHU0 189 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 RTN4IP1Q8WWV3 396 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PHF21AQ96BD5 680 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 EAF1Q96JC9 268 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SELENOIQ9C0D9 397 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 GHRLQ9UBU3 117 aa10.81□□□□□ -0.68
TNFRSF1A-202ENST00000366159 LINC01548A6NM66 108 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 HBZP02008 142 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CD1BP29016 333 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 REG1BP48304 166 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 HES1Q14469 280 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 HNF4GQ14541 408 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ACSM3Q53FZ2 586 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C9orf152Q5JTZ5 239 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C1orf100Q5SVJ3 147 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 FAM27D1Q5T7N8 215 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 STEAP3Q658P3 488 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ZNF554Q86TJ5 538 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 Q8N9W7 124 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 OR1L1Q8NH94 360 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NEK7Q8TDX7 302 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NRG4Q8WWG1 115 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SGCDQ92629 289 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NOL4LQ96MY1 436 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MND1Q9BWT6 205 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TRAPPC2LQ9UL33 140 aa10.8□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGHV3-72A0A0B4J1Y9 119 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PSMB11A5LHX3 300 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 H0YHG0 523 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SPINT2O43291 252 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PDCD6O75340 191 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CRTAPO75718 401 aaPredicted RBP10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 VSIG8P0DPA2 414 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 IGLL1P15814 213 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SLC35A2P78381 396 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 GPR50Q13585 617 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 SPHARQ15513 63 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C6orf183Q5T699 404 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 FOXB2Q5VYV0 432 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TRAT1Q6PIZ9 186 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ETV3LQ6ZN32 361 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 C5orf24Q7Z6I8 188 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MOB3BQ86TA1 216 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ZNF329Q86UD4 541 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 TGIF2LXQ8IUE1 241 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MRPL30Q8TCC3 161 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CHPT1Q8WUD6 406 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PHYHIPQ92561 330 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ABCG5Q9H222 651 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 NECAP2Q9NVZ3 263 aa10.79□□□□□ -0.68
TNFRSF1A-202ENST00000366159 UBE2QL1A1L167 161 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PTGES3LE9PB15 166 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 UBBP0CG47 229 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 PF4V1P10720 104 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 CD33P20138 364 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 QRFPP83859 136 aa10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 GABPB1Q06547 395 aaPredicted RBP10.78□□□□□ -0.68
TNFRSF1A-202ENST00000366159 MORN2Q502X0 79 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms