RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MOB3AQ96BX8 217 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
VCP-201ENST00000358901 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
VCP-201ENST00000358901 INTS1Q8N201 2190 aaKnown RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 SLC25A5P05141 298 aaKnown RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 GFRALQ6UXV0 394 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 OR4A4PQ8NGN8 299 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 PACRGQ96M98 296 aaPredicted RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 B4DEV8 164 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 RBP4P02753 201 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 MDKP21741 143 aaPredicted RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 NR2C2APQ86WQ0 139 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 SLC25A45Q8N413 288 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 OR2T6Q8NHC8 308 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 MRPL30Q8TCC3 161 aaKnown RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 CACNA1HO95180 2353 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 A0A087X0M5 115 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 A0A1B0GX30 115 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 OOEPA6NGQ2 149 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 CRISP2P16562 243 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 ZP1P60852 638 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 LAMTOR1Q6IAA8 161 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 SLC25A40Q8TBP6 338 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 BCL2L2Q92843 193 aaPredicted RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 OR2J1Q9GZK6 312 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 CA11O75493 328 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 DEDDO75618 318 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
VCP-201ENST00000358901 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 G6PC2Q9NQR9 355 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 HSF4Q9ULV5 492 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 FUT9Q9Y231 359 aa11.93□□□□□ -0.5
VCP-201ENST00000358901 WNK2Q9Y3S1 2297 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 GATCO43716 136 aaKnown RBP11.92□□□□□ -0.5
VCP-201ENST00000358901 SCTP09683 121 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 GZMHP20718 246 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 KHDC3LQ587J8 217 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 FAM122AQ96E09 287 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 SCARF2Q96GP6 870 aaPredicted RBP11.92□□□□□ -0.5
VCP-201ENST00000358901 SIRT7Q9NRC8 400 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 OTOFQ9HC10 1997 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 ADRA2AP08913 450 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 UBE2L3P68036 154 aaKnown RBP11.92□□□□□ -0.5
VCP-201ENST00000358901 AESQ08117 197 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 FDX2Q6P4F2 183 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 RSG1Q9BU20 258 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 RNF122Q9H9V4 155 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 TREM2Q9NZC2 230 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 ARHGEF17Q96PE2 2063 aaPredicted RBP11.92□□□□□ -0.5
VCP-201ENST00000358901 ELOA3CA0A087WX78 387 aaPredicted RBP11.92□□□□□ -0.5
VCP-201ENST00000358901 AGFG2O95081 481 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 ORM2P19652 201 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 UBE2V2Q15819 145 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 DEFB124Q8NES8 71 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 OR2M7Q8NG81 312 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 OR4P4Q8NGL7 312 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
VCP-201ENST00000358901 ACTL6AO96019 429 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 FBXW9Q5XUX1 488 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 MYOZ1Q9NP98 299 aaPredicted RBP11.91□□□□□ -0.5
VCP-201ENST00000358901 ZNF253O75346 499 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 PRF1P14222 555 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 PPP1CCP36873 323 aaKnown RBP11.91□□□□□ -0.5
VCP-201ENST00000358901 ID4P47928 161 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 CLN8Q9UBY8 286 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 PSG5Q15238 335 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 DCAF10Q5QP82 559 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 MDP1Q86V88 176 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 RPEQ96AT9 228 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 AQP10Q96PS8 301 aa11.91□□□□□ -0.5
VCP-201ENST00000358901 CTXND1A0A1B0GTU2 59 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 TMPRSS2O15393 492 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 IGKV3-11P04433 115 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 SPNS3Q6ZMD2 512 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 FKBP11Q9NYL4 201 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 DHRS7CA6NNS2 312 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 IGLV3-21P80748 117 aaPredicted RBP11.9□□□□□ -0.5
VCP-201ENST00000358901 GAMTQ14353 236 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 TMEM183BQ1AE95 376 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 MOGAT3Q86VF5 341 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 GAL3ST2Q9H3Q3 398 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 CREBBPQ92793 2442 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 TMEM14DPA8MWL7 114 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 HKR1P10072 659 aa11.9□□□□□ -0.5
VCP-201ENST00000358901 B2MP61769 119 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms