RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 MRGPRX3Q96LB0 322 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 VSTM2LQ96N03 204 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 SLC23A3Q6PIS1 610 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 EVX1P49640 407 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 CALHM1Q8IU99 346 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 TOMM7Q9P0U1 55 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 ISLRO14498 428 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 PGFP49763 221 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 INSL4Q14641 139 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 WDR38Q5JTN6 314 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 GPA33Q99795 319 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 LHX9Q9NQ69 397 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 HMGA1P17096 107 aaKnown RBP15.2■□□□□ 0.02
COL27A1-201ENST00000356083 KHDC3LQ587J8 217 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 FIZ1Q96SL8 496 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 NTMQ9P121 344 aa15.2■□□□□ 0.02
COL27A1-201ENST00000356083 TIAM2Q8IVF5 1701 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 SNURFLB1AK76 121 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 NPFFO15130 113 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 SPICQ8N5J4 248 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 DNAJB12Q9NXW2 375 aaKnown RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 TRDCB7Z8K6 153 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 PLA2G2FQ9BZM2 168 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 F11RQ9Y624 299 aaKnown RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 C9orf170A2RU37 121 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 WNT9BO14905 357 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 FUNDC1Q8IVP5 155 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 IGHV3-35A0A0C4DH35 117 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 DIRC3C9JPN6 131 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 CELA2BP08218 269 aaPredicted RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 GLULP15104 373 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 IL9P15248 144 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 B4GALNT1Q00973 533 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 SSTR5P35346 364 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 RTN4RL1Q86UN2 441 aaPredicted RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 OR2C3Q8N628 320 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 DXOO77932 396 aaKnown RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 HIST1H1DP16402 221 aaKnown RBP15.19■□□□□ 0.02
COL27A1-201ENST00000356083 CCR2P41597 374 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 RAB32Q13637 225 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 CDCA4Q9BXL8 241 aa15.19■□□□□ 0.02
COL27A1-201ENST00000356083 DUSP21Q9H596 190 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 TMEM38BQ9NVV0 291 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 ZAR1LA6NP61 321 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 J3QR06 171 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 FCARP24071 287 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 ZNF680Q8NEM1 530 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 NPFFR1Q9GZQ6 430 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 RNF7Q9UBF6 113 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 WNT5BQ9H1J7 359 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 FCGR2BP31994 310 aaPredicted RBP15.18■□□□□ 0.02
COL27A1-201ENST00000356083 PMS2CLQ68D20 193 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 PIPOXQ9P0Z9 390 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 PROB1E7EW31 1015 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 LGALS3P17931 250 aaKnown RBP15.18■□□□□ 0.02
COL27A1-201ENST00000356083 METAP1P53582 386 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 DLEU7Q6UYE1 221 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 OR2T10Q8NGZ9 312 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 ITLN2Q8WWU7 325 aaPredicted RBP15.18■□□□□ 0.02
COL27A1-201ENST00000356083 EID2BQ96D98 161 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 HIGD1AQ9Y241 93 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 OR51B2Q9Y5P1 312 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 TMEM56-RWDD3S4R434 201 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 C9JCJ5 164 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 THY1P04216 161 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 TMEM255AQ5JRV8 349 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 ADTRPQ96IZ2 230 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 MANBALQ9NQG1 85 aa15.18■□□□□ 0.02
COL27A1-201ENST00000356083 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 TSPAN2O60636 221 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 PPP1R1AQ13522 171 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 ZNF658BQ4V348 819 aaPredicted RBP15.17■□□□□ 0.02
COL27A1-201ENST00000356083 RHBDD2Q6NTF9 364 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 CCDC144NLQ6NUI1 221 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 FUT9Q9Y231 359 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 REG1AP05451 166 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 SLC25A42Q86VD7 318 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 DUXBA0A1W2PPF3 345 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 DLL1O00548 723 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 CCL4P13236 92 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 C2orf83Q53S99 150 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 CTF1Q16619 201 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 ABHD14BQ96IU4 210 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 IGHV3-66A0A0C4DH42 116 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 YBX1P67809 324 aaKnown RBP15.17■□□□□ 0.02
COL27A1-201ENST00000356083 TRA2AQ13595 282 aaKnown RBP eCLIP15.17■□□□□ 0.023e-7■■■■■ 36
COL27A1-201ENST00000356083 OR1L8Q8NGR8 309 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 SPTY2D1-AS1A0A0U1RR47 76 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 HIST1H1BP16401 226 aaKnown RBP15.17■□□□□ 0.02
COL27A1-201ENST00000356083 CADM3Q8N126 398 aa15.17■□□□□ 0.02
COL27A1-201ENST00000356083 C4AP0C0L4 1744 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.16■□□□□ 0.02
COL27A1-201ENST00000356083 ASB5Q8WWX0 329 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 ISOC2Q96AB3 205 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 RAX2Q96IS3 184 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 TSPAN32Q96QS1 320 aa15.16■□□□□ 0.02
COL27A1-201ENST00000356083 SLC25A19Q9HC21 320 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms