RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PCOLCEQ15113 449 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 ZNF383Q8NA42 475 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 POC1AQ8NBT0 407 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 RSPO3Q9BXY4 272 aaPredicted RBP10.68□□□□□ -0.7
COLCA1-201ENST00000355430 OPN3Q9H1Y3 402 aaPredicted RBP10.68□□□□□ -0.7
COLCA1-201ENST00000355430 A0A0U1RQV5 110 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 CRYM-AS1A6NIL9 109 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 IGKV3-11P04433 115 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 LY6G6FQ5SQ64 297 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 PLPPR2Q96GM1 343 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
COLCA1-201ENST00000355430 TMEM38BQ9NVV0 291 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 OR5B21A6NL26 309 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
COLCA1-201ENST00000355430 VDAC1P21796 283 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 CDCP2Q5VXM1 449 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 PIMREGQ9BSJ6 248 aa10.68□□□□□ -0.7
COLCA1-201ENST00000355430 A0A1W2PNV4 684 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SOX15O60248 233 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 CDS2O95674 445 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 RAB4AP20338 218 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 DHRS7BQ6IAN0 325 aaPredicted RBP10.67□□□□□ -0.7
COLCA1-201ENST00000355430 PITX3O75364 302 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 RUNX1Q01196 453 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 LY86O95711 162 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 NGFP01138 241 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 THBS3P49746 956 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 PLAC9Q5JTB6 97 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 ZDHHC11Q9H8X9 412 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 TRAPPC1Q9Y5R8 145 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 DHRS11Q6UWP2 260 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SPSB2Q99619 263 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 COMMD5Q9GZQ3 224 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 CACNA1IQ9P0X4 2223 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 DEFB108AA8MXU0 73 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 RPL36A-HNRNPH2H7BZ11 118 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SYNGR2O43760 224 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SNX22Q96L94 193 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 ELOVL5Q9NYP7 299 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 RNF7Q9UBF6 113 aa10.67□□□□□ -0.7
COLCA1-201ENST00000355430 ZNHIT1O43257 154 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 MOB1BQ7L9L4 216 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR52M1Q8NGK5 317 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 RNF115Q9Y4L5 304 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 IGFBP3P17936 291 aaPredicted RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 CHRNA7P36544 502 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 ATP5J2P56134 94 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 SNAI3Q3KNW1 292 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 VMA21Q3ZAQ7 101 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 CCL19Q99731 98 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 NUDT16L1Q9BRJ7 211 aaKnown RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR2D2Q9H210 308 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 HES4Q9HCC6 221 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 ELOA3CA0A087WX78 387 aaPredicted RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 TRAV39A0A0B4J263 110 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 HIKESHIQ53FT3 197 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 NSUN5P2Q63ZY6 315 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR10G4Q8NGN3 311 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR10G9Q8NGN4 311 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR10G7Q8NGN6 311 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 CACFD1Q9UGQ2 172 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 A0A1B0GTI1 187 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 CYB561D1Q8N8Q1 229 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 OR10AD1Q8NGE0 317 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 SLC25A28Q96A46 364 aa10.66□□□□□ -0.7
COLCA1-201ENST00000355430 CISD1Q9NZ45 108 aaKnown RBP10.66□□□□□ -0.7
COLCA1-201ENST00000355430 THSD7BQ9C0I4 1608 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 KLK2P20151 261 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 FHITP49789 147 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 UBE2V2Q15819 145 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 ZNF439Q8NDP4 499 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 SLC35E1Q96K37 410 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 RARRES2Q99969 163 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 NAT8Q9UHE5 227 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 UNC13CQ8NB66 2214 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 DHRS7CA6NNS2 312 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 F2RL2O00254 374 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 ZNF708P17019 499 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 COX7A1P24310 79 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.7
COLCA1-201ENST00000355430 A0A0J9YW62 118 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 OPN1MWP04001 364 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 CLEC3BP05452 202 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 OPN1MW2P0DN77 364 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 OPN1MW3P0DN78 364 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 PSG2P11465 335 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 FOXO1Q12778 655 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 PMS2P11Q13670 270 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 COL19A1Q14993 1142 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 DBX2Q6ZNG2 339 aa10.65□□□□□ -0.7
COLCA1-201ENST00000355430 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.65□□□□□ -0.7
COLCA1-201ENST00000355430 IGHV3-43A0A0B4J1X8 118 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 SH2D7A6NKC9 451 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms