RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CCDC54Q8NEL0 328 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM171Q8WVE6 324 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 C11orf1Q9H5F2 150 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 PARPBPQ9NWS1 579 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 TMED3Q9Y3Q3 217 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ICE1Q9Y2F5 2266 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 A0A1B0GW64 132 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF587BE7ETH6 402 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 SS18L1O75177 396 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-204ENST00000353317 TNFSF13O75888 250 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 OR2C1O95371 312 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 NRASP01111 189 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 LCATP04180 440 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 OMGP23515 440 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ATP6V0CP27449 155 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 MAS1LP35410 378 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 TDGF1P3P51864 188 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 UCP3P55916 312 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 DAZAP2Q15038 168 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-204ENST00000353317 IGSF11Q5DX21 431 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 BATF2Q8N1L9 274 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 LFNGQ8NES3 379 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 OR2G3Q8NGZ4 309 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 TCTEX1D2Q8WW35 142 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 SLAMF9Q96A28 289 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 SARAFQ96BY9 339 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 GMPPAQ96IJ6 420 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF286AQ9HBT8 521 aa7.33□□□□□ -1.24
TRIM55-204ENST00000353317 C3orf85A0A1B0GTC6 90 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 IGSF23A1L1A6 192 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 PPYP01298 95 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 IGHV1-2P23083 117 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 GNRHRP30968 328 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 RAB1AP62820 205 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 RAB35Q15286 201 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 HAGHQ16775 308 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 FBXW9Q5XUX1 488 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM42Q69YG0 159 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 SPSB3Q6PJ21 355 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 LHFPL2Q6ZUX7 228 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 FAM214BQ7L5A3 538 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 C5orf24Q7Z6I8 188 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 C1QL4Q86Z23 238 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 SUMF2Q8NBJ7 301 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 OR1F12Q8NHA8 337 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 TINAGQ9UJW2 476 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 RBFOX3A6NFN3 312 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 MPPED1O15442 326 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 S100PP25815 95 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 TMPRSS3P57727 454 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 RND3P61587 244 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF266Q14584 549 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 P4HA3Q7Z4N8 544 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 CALHM1Q8IU99 346 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 CNEP1R1Q8N9A8 125 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 BCL2L2Q92843 193 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-204ENST00000353317 SNRNP40Q96DI7 357 aaKnown RBP7.32□□□□□ -1.24
TRIM55-204ENST00000353317 MUCL1Q96DR8 90 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 GPHA2Q96T91 129 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 BCL2L14Q9BZR8 327 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM222Q9H0R3 208 aa7.32□□□□□ -1.24
TRIM55-204ENST00000353317 PDCD6O75340 191 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 LYZL6O75951 148 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 YIF1AO95070 293 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CDS2O95674 445 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CGAP01215 116 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 IFNA17P01571 189 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 EDN3P14138 238 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 NKX2-1P43699 371 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 RPS10P46783 165 aaKnown RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 HTR5AP47898 357 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 HERV-K104P61576 105 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF92Q03936 586 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CXorf66Q5JRM2 361 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ODF3L1Q8IXM7 274 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CCDC71LQ8N9Z2 235 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 OR1K1Q8NGR3 316 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 STARD4Q96DR4 205 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 MAGT1Q9H0U3 335 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF442Q9H7R0 627 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 MMP24Q9Y5R2 645 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 IFITM10A6NMD0 228 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TRDCB7Z8K6 153 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 H3BQ15 152 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 SSSCA1O60232 199 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 PITX3O75364 302 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 OR7C1O76099 320 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 TMEM50AO95807 157 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CELA3BP08861 270 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 FBP1P09467 338 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 NPBWR2P48146 333 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 CEBPGP53567 150 aa7.31□□□□□ -1.24
TRIM55-204ENST00000353317 RBM11P57052 281 aaKnown RBP7.31□□□□□ -1.24
TRIM55-204ENST00000353317 MALLQ13021 153 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms