RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 LAMP3Q9UQV4 416 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 MRPS28Q9Y2Q9 187 aaKnown RBP6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 TECTAO75443 2155 aa6.59□□□□□ -1.35
UBE2D3-204ENST00000349311 PCDH15Q96QU1 1955 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 IGKV1D-42A0A075B6H8 117 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CLEC18AA5D8T8 446 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 MAP1LC3B2A6NCE7 125 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 SERINC4A6NH21 518 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 H7BYZ3 331 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 H7C1C5 153 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 OVOL3O00110 214 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 HCRTR2O43614 444 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CIDEAO60543 219 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 MMP23AO75900 390 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 HRASP01112 189 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PPBPP02775 128 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 IGHV4-34P06331 123 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 SMIM10L1P0DMW3 83 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 BCL2P10415 239 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM11P17152 192 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CD38P28907 300 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CNN1P51911 297 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 SNU13P55769 128 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 RPS20P60866 119 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 UBE2NP61088 152 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 RAB11AP62491 216 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 LCN6P62502 163 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 BAXQ07812 192 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 FOXF2Q12947 444 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 IL24Q13007 206 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TRA2AQ13595 282 aaKnown RBP eCLIP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 EXOSC7Q15024 291 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 ATP6V1FQ16864 119 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PRICKLE4Q2TBC4 344 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 ACSF3Q4G176 576 aaPredicted RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 ABCA11PQ4W5N1 156 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 KCNIP4Q6PIL6 250 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 DNM1P34Q6PK57 102 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 KLHL24Q6TFL4 600 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 Q6ZS52 159 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 COX15Q7KZN9 410 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 C16orf82Q7Z2V1 217 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CMTM1Q8IZ96 169 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CCDC71LQ8N9Z2 235 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CLEC18CQ8NCF0 446 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TSTD1Q8NFU3 115 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 OR5D14Q8NGL3 314 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 OR1N1Q8NGS0 311 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 MOB3AQ96BX8 217 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 SMIM10Q96HG1 83 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 THOC3Q96J01 351 aaKnown RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 MS4A10Q96PG2 267 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PCGF1Q9BSM1 259 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 ABHD6Q9BV23 337 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM59Q9BXS4 323 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 MAP1LC3BQ9GZQ8 125 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 WWTR1Q9GZV5 400 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 RBKSQ9H477 322 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 KIR3DX1Q9H7L2 352 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PLEKHF2Q9H8W4 249 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 ELL3Q9HB65 397 aaPredicted RBP6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 FGF22Q9HCT0 170 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 G6PC2Q9NQR9 355 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 PADI1Q9ULC6 663 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 RNF150Q9ULK6 438 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 DAPP1Q9UN19 280 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 TTC28Q96AY4 2481 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 BDP1A6H8Y1 2624 aa6.58□□□□□ -1.36
UBE2D3-204ENST00000349311 CHD3Q12873 2000 aaKnown RBP6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 RALGAPA1Q6GYQ0 2036 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 UNC13CQ8NB66 2214 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 IGLV1-36A0A0B4J1U3 117 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 IGHV1OR15-9A0A0B4J2B8 117 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 PRSS37A4D1T9 235 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 A6NCN8 305 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 C4orf47A7E2U8 309 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 SERPINE3A8MV23 424 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 P2RY10O00398 339 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 SLC31A1O15431 190 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 NXPH2O95156 264 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 CDS2O95674 445 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 MMP7P09237 267 aaPredicted RBP6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 H2BFMP0C1H6 154 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 ZNF823P16415 610 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 SELEP16581 610 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 ZNF93P35789 620 aaPredicted RBP6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 GALR1P47211 349 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 TPPP2P59282 170 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 RPL27P61353 136 aaKnown RBP6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 RUNX2Q13950 521 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 TMEM187Q14656 261 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 P2RY6Q15077 328 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 OR8G2PQ6IF36 304 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 GLIPR1L1Q6UWM5 242 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 CYP2G1PQ6ZSU1 146 aa6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 CENPVQ7Z7K6 275 aaPredicted RBP6.57□□□□□ -1.36
UBE2D3-204ENST00000349311 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms