RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 APCSP02743 223 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 SCMH1Q96GD3 660 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 MARVELD1Q9BSK0 173 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 KLF7O75840 302 aaPredicted RBP20.16■□□□□ 0.82
NPAS3-201ENST00000346562 TTRP02766 147 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 REG1BP48304 166 aa20.16■□□□□ 0.82
NPAS3-201ENST00000346562 ECM29Q5VYK3 1845 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 CLDN14O95500 239 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 CRHP06850 196 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 MRPL24Q96A35 216 aaKnown RBP20.15■□□□□ 0.82
NPAS3-201ENST00000346562 IGHV1-45A0A0A0MS14 117 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 DHRS7CA6NNS2 312 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 WNT5AP41221 380 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 SNRPEP62304 92 aaKnown RBP20.15■□□□□ 0.82
NPAS3-201ENST00000346562 MARS2Q96GW9 593 aaKnown RBP20.15■□□□□ 0.82
NPAS3-201ENST00000346562 METTL26Q96S19 204 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 HYPMO75409 117 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 MIEN1Q9BRT3 115 aa20.15■□□□□ 0.82
NPAS3-201ENST00000346562 A0A1W2PPV9 198 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 ZNF735P0CB33 412 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 RBM11P57052 281 aaKnown RBP20.14■□□□□ 0.82
NPAS3-201ENST00000346562 ZNF343Q6P1L6 599 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 PGLYRP3Q96LB9 341 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 PAXXQ9BUH6 204 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 PRDM14Q9GZV8 571 aa20.14■□□□□ 0.82
NPAS3-201ENST00000346562 NKX2-6A6NCS4 301 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 AHRRA9YTQ3 701 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 ATXN7O15265 892 aaPredicted RBP20.14■□□□□ 0.81
NPAS3-201ENST00000346562 PRNTQ86SH4 94 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 ADIPOR1Q96A54 375 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 PAGE4O60829 102 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 MC5RP33032 325 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 MRPL54Q6P161 138 aaKnown RBP20.14■□□□□ 0.81
NPAS3-201ENST00000346562 IGHV3-21A0A0B4J1V1 117 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 M0R3E3 92 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 WNT9BO14905 357 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 ZP4Q12836 540 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 MRGPRGQ86SM5 289 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 NUP37Q8NFH4 326 aa20.14■□□□□ 0.81
NPAS3-201ENST00000346562 PLPPR5Q32ZL2 321 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 ABHD1Q96SE0 405 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 HIST1H1BP16401 226 aaKnown RBP20.13■□□□□ 0.81
NPAS3-201ENST00000346562 UCP2P55851 309 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 RELBQ01201 579 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 FAM214BQ7L5A3 538 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 CTXND1A0A1B0GTU2 59 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 MGST3O14880 152 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 TMEM78Q5T7P6 136 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 ZNF841Q6ZN19 808 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 A0A1W2PPE3 182 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 PRR33A8MZF0 331 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 SEZ6L2Q6UXD5 910 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 ZNF519Q8TB69 540 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 C16orf92Q96LL3 132 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 CCL13Q99616 98 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 ATG101Q9BSB4 218 aa20.13■□□□□ 0.81
NPAS3-201ENST00000346562 CD160O95971 181 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 RNFT1Q5M7Z0 435 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 CCL8P80075 99 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 OR4A5Q8NH83 315 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 RPL27AP46776 148 aaKnown RBP20.12■□□□□ 0.81
NPAS3-201ENST00000346562 TM4SF20Q53R12 229 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 OR2D3Q8NGH3 330 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 HILPDAQ9Y5L2 63 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 EVPLQ92817 2033 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 CEACAM21Q3KPI0 293 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 AWAT1Q58HT5 328 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 ZDHHC8Q9ULC8 765 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 A6NDN8 102 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 OR4C45A6NMZ5 311 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 TWIST1Q15672 202 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 STPG3Q8N7X2 389 aa20.12■□□□□ 0.81
NPAS3-201ENST00000346562 DLK1P80370 383 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 OR8A1Q8NGG7 326 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 AMMECR1LQ6DCA0 310 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 BVESQ8NE79 360 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 OR4D11Q8NGI4 311 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 DYRK2Q92630 601 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 CDRT15L2A8MXV6 281 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 HOGA1Q86XE5 327 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 ZNF501Q96CX3 271 aaPredicted RBP20.11■□□□□ 0.81
NPAS3-201ENST00000346562 METTL1Q9UBP6 276 aaKnown RBP20.11■□□□□ 0.81
NPAS3-201ENST00000346562 PITX3O75364 302 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 IGHV4-34P06331 123 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 PF4V1P10720 104 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 SIRT7Q9NRC8 400 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 TMEM140Q9NV12 185 aa20.11■□□□□ 0.81
NPAS3-201ENST00000346562 VSIG8P0DPA2 414 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 KLF9Q13886 244 aaPredicted RBP20.1■□□□□ 0.81
NPAS3-201ENST00000346562 ZNF385AQ96PM9 386 aaKnown RBP20.1■□□□□ 0.81
NPAS3-201ENST00000346562 NRTNQ99748 197 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 PDE4DIPQ5VU43 2346 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TMEM189A5PLL7 270 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 LAMTOR1Q6IAA8 161 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TMSB15BA0A087X1C1 80 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 NPIPB6E9PJ23 425 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 PEBP1P30086 187 aaKnown RBP20.1■□□□□ 0.81
NPAS3-201ENST00000346562 LDLRAD3Q86YD5 345 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 OR1N2Q8NGR9 330 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 SCNM1Q9BWG6 230 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms