RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 NOTCH3Q9UM47 2321 aa11.28□□□□□ -0.6
TCF3-202ENST00000344749 C5orf63A6NC05 138 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 CYTIPO60759 359 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 CNIH1O95406 144 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.6
TCF3-202ENST00000344749 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.6
TCF3-202ENST00000344749 NHLRC3Q5JS37 347 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 SAT2Q96F10 170 aaPredicted RBP11.27□□□□□ -0.6
TCF3-202ENST00000344749 TAAR6Q96RI8 345 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 SAMD10Q9BYL1 202 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 CXXC4Q9H2H0 198 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 DEPPQ9NTK1 212 aa11.27□□□□□ -0.6
TCF3-202ENST00000344749 MBPP02686 304 aaPredicted RBP11.27□□□□□ -0.61
TCF3-202ENST00000344749 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 PAQR4Q8N4S7 273 aaPredicted RBP11.27□□□□□ -0.61
TCF3-202ENST00000344749 FADS6Q8N9I5 356 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 DDA1Q9BW61 102 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 GALR2O43603 387 aaPredicted RBP11.27□□□□□ -0.61
TCF3-202ENST00000344749 OR5G3P0C626 314 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 G6PCP35575 357 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 C1orf87Q8N0U7 546 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
TCF3-202ENST00000344749 GMPPAQ96IJ6 420 aaPredicted RBP11.27□□□□□ -0.61
TCF3-202ENST00000344749 OPN3Q9H1Y3 402 aaPredicted RBP11.27□□□□□ -0.61
TCF3-202ENST00000344749 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ZNF528Q3MIS6 628 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 FFAR4Q5NUL3 377 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 OR52M1Q8NGK5 317 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ACY3Q96HD9 319 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 LAMP3Q9UQV4 416 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 MBP02144 154 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 S100A8P05109 93 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 DEFA4P12838 97 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 P2RY1P47900 373 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 BHLHA15Q7RTS1 189 aaPredicted RBP11.26□□□□□ -0.61
TCF3-202ENST00000344749 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.619e-7■■■□□ 16.2
TCF3-202ENST00000344749 CDS2O95674 445 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 RPS2P15880 293 aaKnown RBP11.26□□□□□ -0.61
TCF3-202ENST00000344749 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
TCF3-202ENST00000344749 AWAT1Q58HT5 328 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 SLC25A28Q96A46 364 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 NDRG3Q9UGV2 375 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 TMPRSS2O15393 492 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 KCNJ3P48549 501 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 UCP2P55851 309 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 ASPHD2Q6ICH7 369 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 IL36RNQ9UBH0 155 aa11.26□□□□□ -0.61
TCF3-202ENST00000344749 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 E9PQ18 207 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 MUC1P15941 1255 aaPredicted RBP11.25□□□□□ -0.61
TCF3-202ENST00000344749 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
TCF3-202ENST00000344749 FAM74A3Q4VXF1 159 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 BOD1Q96IK1 185 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 FHITP49789 147 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 LINC00518Q8N0U6 118 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 FDCSPQ8NFU4 85 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
TCF3-202ENST00000344749 TICRRQ7Z2Z1 1910 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 FAM90A27PA6NNH2 459 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 F2RP25116 425 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
TCF3-202ENST00000344749 STPG2Q8N412 459 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 RNF122Q9H9V4 155 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 SLC2A8Q9NY64 477 aa11.25□□□□□ -0.61
TCF3-202ENST00000344749 SYNGR3O43761 229 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 OR2H2O95918 312 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 STUMQ69YW2 141 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 SLC35E1Q96K37 410 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 DLL3Q9NYJ7 618 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 MIOXQ9UGB7 285 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 PLXNA2O75051 1894 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 A0A1W2PR64 198 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 PINLYPA6NC86 204 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 C9orf172C9J069 976 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 TNFRSF1AP19438 455 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 RAB13P51153 203 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 ERVS71-1P61550 626 aa11.24□□□□□ -0.61
TCF3-202ENST00000344749 INO80CQ6PI98 192 aaPredicted RBP11.24□□□□□ -0.61
TCF3-202ENST00000344749 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
TCF3-202ENST00000344749 CPEB3Q8NE35 698 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms