RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GNMTQ14749 295 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 KRBOX4Q5JUW0 171 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 SLC35E4Q6ICL7 350 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 PIK3IP1Q96FE7 263 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 SLC5A7Q9GZV3 580 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 NGBQ9NPG2 151 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 NDRG3Q9UGV2 375 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 GLS2Q9UI32 602 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 TUBAL3A6NHL2 446 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 DEFB108AA8MXU0 73 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 M0R233 179 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 RGS13O14921 159 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 DIRAS3O95661 229 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 HEXAP06865 529 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 UTF1Q5T230 341 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 OR52L2PQ8NGH6 319 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 MSI2Q96DH6 328 aaKnown RBP11.33□□□□□ -0.6
CDC42-202ENST00000344548 KCNJ16Q9NPI9 418 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 OR2W1Q9Y3N9 320 aa11.33□□□□□ -0.6
CDC42-202ENST00000344548 A0A0B4J2A0 478 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 H0YIZ8 118 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 CD3EP07766 207 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 CTXN2P0C2S0 81 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 LYZL2Q7Z4W2 148 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 TBC1D26Q86UD7 250 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 GALNT14Q96FL9 552 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 METTL8Q9H825 291 aaKnown RBP11.32□□□□□ -0.6
CDC42-202ENST00000344548 RAB18Q9NP72 206 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 SHPKQ9UHJ6 478 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 MPPED1O15442 326 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 PHF1O43189 567 aaPredicted RBP11.32□□□□□ -0.6
CDC42-202ENST00000344548 FCN3O75636 299 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 HBZP02008 142 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 GYPAP02724 150 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 ADH4P08319 380 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 IL15RAQ13261 267 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 LPCAT3Q6P1A2 487 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 SSX8Q7RTT4 187 aa11.32□□□□□ -0.6
CDC42-202ENST00000344548 CISD1Q9NZ45 108 aaKnown RBP11.32□□□□□ -0.6
CDC42-202ENST00000344548 IGHV3-43A0A0B4J1X8 118 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 H7C1Q1 480 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 RGS11O94810 467 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 CFDP00746 253 aaPredicted RBP11.31□□□□□ -0.6
CDC42-202ENST00000344548 CD55P08174 381 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 IGHV3-43DP0DP04 118 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 CEACAM6P40199 344 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 AP2S1P53680 142 aaPredicted RBP11.31□□□□□ -0.6
CDC42-202ENST00000344548 STUMQ69YW2 141 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 GSG1LQ6UXU4 331 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 SLC7A5P1Q8MH63 180 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 Q8TCH9 128 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 CCL13Q99616 98 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
CDC42-202ENST00000344548 PAIP2BQ9ULR5 123 aaKnown RBP11.31□□□□□ -0.6
CDC42-202ENST00000344548 C3orf85A0A1B0GTC6 90 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 NPIPB11E5RHQ5 1161 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 K7N7A8 449 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 OR8U9P0C7N5 309 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 TNFSF4P23510 183 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 GGNBP1Q5YKI7 109 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 OR8U1Q8NH10 309 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 GON7Q9BXV9 100 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 C15orf65H3BRN8 121 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 GPR31O00270 319 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 HSPA12AO43301 675 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
CDC42-202ENST00000344548 APOBEC3AP31941 199 aaPredicted RBP11.3□□□□□ -0.6
CDC42-202ENST00000344548 LTC4SQ16873 150 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 BEX5Q5H9J7 111 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 MEX3BQ6ZN04 569 aaKnown RBP11.3□□□□□ -0.6
CDC42-202ENST00000344548 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 C5orf30Q96GV9 206 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 SNX22Q96L94 193 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 GAFA1Q96PS6 74 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 GSKIPQ9P0R6 139 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 FBXO9Q9UK97 447 aaPredicted RBP11.3□□□□□ -0.6
CDC42-202ENST00000344548 RNF150Q9ULK6 438 aa11.3□□□□□ -0.6
CDC42-202ENST00000344548 OMGP23515 440 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 PPP1CCP36873 323 aaKnown RBP11.29□□□□□ -0.6
CDC42-202ENST00000344548 LIAT1Q6ZQX7 453 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 CCL17Q92583 94 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 ARL11Q969Q4 196 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 MBD2Q9UBB5 411 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 KCNIP3Q9Y2W7 256 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 DSCAML1Q8TD84 2053 aa11.29□□□□□ -0.6
CDC42-202ENST00000344548 SPTAN1Q13813 2472 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms