RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FCGR3BO75015 233 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 MAGEA5P43359 124 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CCL20P78556 96 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 ZNF818PQ6ZRF7 136 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 TMPRSS7Q7RTY8 843 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 OR2Y1Q8NGV0 311 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CYTL1Q9NRR1 136 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CLN8Q9UBY8 286 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 A0A1W2PR77 199 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CXorf65A6NEN9 183 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 PAGE4O60829 102 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CLN5O75503 358 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 EGR1P18146 543 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 ARR3P36575 388 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 OR1C1Q15619 314 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM211Q6ICI0 200 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM222Q9H0R3 208 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 TINAGQ9UJW2 476 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CLDN16Q9Y5I7 305 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 AUP1Q9Y679 476 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 A0A1W2PPE3 182 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 IGSF23A1L1A6 192 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 C9JQL5 133 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 RPP30P78346 268 aaKnown RBP10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 SMIM8Q96KF7 97 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TRIB1Q96RU8 372 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 RIMS4Q9H426 269 aaPredicted RBP10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 KIAA1456Q9P272 454 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 OR5H1A6NKK0 313 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 SELEP16581 610 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 HABP2Q14520 560 aaPredicted RBP10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 IGFBP7Q16270 282 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TXN2Q99757 166 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 GPR87Q9BY21 358 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 HTTP42858 3142 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 FGF16O43320 207 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 ZNF17P17021 662 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 KRTDAPP60985 99 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 GGACTQ9BVM4 153 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 MRPL13Q9BYD1 178 aaKnown RBP10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TRAPPC1Q9Y5R8 145 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 F6UZH7 168 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 CST2P09228 141 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 IRF2P14316 349 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 F2RP25116 425 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 PRR27Q6MZM9 219 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 ZNF439Q8NDP4 499 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 MARS2Q96GW9 593 aaKnown RBP10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 LYZL4Q96KX0 146 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM68Q96MH6 324 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 TAAR3PQ9P1P4 343 aa10.73□□□□□ -0.69
SNRNP48-201ENST00000342415 PLXNB3Q9ULL4 1909 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 PRRC2CQ9Y520 2896 aaKnown RBP10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 PRR19A6NJB7 356 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 RPL36A-HNRNPH2H7BZ11 118 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 M0R1X1 148 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 RFPL3SP0C7P2 107 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 FAM3BP58499 235 aaPredicted RBP10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 DMWDQ09019 674 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 IL11RAQ14626 422 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 OR8B8Q15620 311 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 HS3ST3B1Q9Y662 390 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 ZFHX2Q9C0A1 2572 aaPredicted RBP10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 SHISA7A6NL88 538 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 LDLRAD4O15165 306 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 CLPSP04118 112 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 LTBRP36941 435 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 CEBPDP49716 269 aaPredicted RBP10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 OR10A7Q8NGE5 316 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 ABHD5Q8WTS1 349 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 OR51M1Q9H341 326 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 Q9N2K0 584 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 TREM2Q9NZC2 230 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 TRAV34A0A0B4J273 112 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 F8VVB4 439 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 F8VWA3 439 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 IGHMP01871 453 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 ACOT6Q3I5F7 207 aaPredicted RBP10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 DBX2Q6ZNG2 339 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 HES7Q9BYE0 225 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 RPRMQ9NS64 109 aa10.72□□□□□ -0.69
SNRNP48-201ENST00000342415 SLC22A20A6NK97 555 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 TNFSF15O95150 251 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 IGHEP01854 428 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 HLA-GP17693 338 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 MDH2P40926 338 aaKnown RBP10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 EIF3IQ13347 325 aaKnown RBP10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 GPR146Q96CH1 333 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 BTF3L4Q96K17 158 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 HEATR1Q9H583 2144 aaKnown RBP10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 A0A1B0GTQ1 180 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 LOC390937A0A1W2PQ73 354 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 PROB1E7EW31 1015 aa10.71□□□□□ -0.69
SNRNP48-201ENST00000342415 YKT6O15498 198 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms