RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ODAMA1E959 279 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 MEX3AA1L020 520 aaKnown RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 SIGLEC5O15389 551 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 PPYP01298 95 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 HLA-AP01891 365 aaKnown RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 SELLP14151 372 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 TRAT1Q6PIZ9 186 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ZNF788Q6ZQV5 615 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 SLC25A42Q86VD7 318 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ADAD2Q8NCV1 583 aaKnown RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 HRNRQ86YZ3 2850 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 LRBAP50851 2863 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 A0A1B0GW55 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 A8MV72 311 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 SNRPGP15A8MWD9 76 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ADAM20O43506 726 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L2P0CJ85 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L3P0CJ86 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L4P0CJ87 422 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L5P0CJ88 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L6P0CJ89 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L7P0CJ90 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 CDKN1AP38936 164 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 P2RX3P56373 397 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 HERPUD1Q15011 391 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ZFP69Q49AA0 526 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ZNF626Q68DY1 528 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ZNF660Q6AZW8 331 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4L9Q6RFH8 374 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 NINJ1Q92982 152 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 CLEC4MQ9H2X3 399 aaPredicted RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 C5orf66Q9H5L9 145 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 DUX4Q9UBX2 424 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 RBM7Q9Y580 266 aaKnown RBP14.45□□□□□ -0.1
CLDN4-201ENST00000340958 MAST4O15021 2626 aa14.45□□□□□ -0.1
CLDN4-201ENST00000340958 ARFGEF3Q5TH69 2177 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 IGKV1-6A0A0C4DH72 117 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 SPINT2O43291 252 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 DAOP14920 347 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 CD83Q01151 205 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 HMGN3Q15651 99 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 OR13A1Q8NGR1 328 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 ZNF431Q8TF32 576 aaPredicted RBP14.44□□□□□ -0.1
CLDN4-201ENST00000340958 ARL11Q969Q4 196 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 LIME1Q9H400 295 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 OR6C3Q9NZP0 311 aa14.44□□□□□ -0.1
CLDN4-201ENST00000340958 SLC25A10Q9UBX3 287 aaPredicted RBP14.44□□□□□ -0.1
CLDN4-201ENST00000340958 C12orf77C9JDV5 145 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 NDUFB3O43676 98 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 NDUFA2O43678 99 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 LY6HO94772 140 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 HBZP02008 142 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 GZMHP20718 246 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 ZBTB25P24278 435 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 FCN2Q15485 313 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 LRRC10Q5BKY1 277 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 CD276Q5ZPR3 534 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 FAHD2BQ6P2I3 314 aaPredicted RBP14.43□□□□□ -0.1
CLDN4-201ENST00000340958 OR1L1Q8NH94 360 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 CASTOR1Q8WTX7 329 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 SECTM1Q8WVN6 248 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 MOB3AQ96BX8 217 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 FAHD2AQ96GK7 314 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TIMD4Q96H15 378 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 LURAP1Q96LR2 239 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 CABLES2Q9BTV7 478 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 OR1A1Q9P1Q5 309 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TRBV6-7A0A0A0MS04 114 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TEX13DA0A0J9YY54 714 aaPredicted RBP14.43□□□□□ -0.1
CLDN4-201ENST00000340958 CEACAM18A8MTB9 384 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 SSTR5P35346 364 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 PAX5Q02548 391 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 PPP1R1AQ13522 171 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TMEM128Q5BJH2 165 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 LPCAT3Q6P1A2 487 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 SLC38A6Q8IZM9 456 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 MUC20Q8N307 709 aaPredicted RBP14.43□□□□□ -0.1
CLDN4-201ENST00000340958 RFESDQ8TAC1 157 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 DCTN5Q9BTE1 182 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 FXYD6Q9H0Q3 95 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TEX15Q9BXT5 2789 aa14.43□□□□□ -0.1
CLDN4-201ENST00000340958 TRGV10A0A0A0MS01 117 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 PPIHO43447 177 aaKnown RBP14.42□□□□□ -0.1
CLDN4-201ENST00000340958 CTSDP07339 412 aaPredicted RBP14.42□□□□□ -0.1
CLDN4-201ENST00000340958 CEACAM6P40199 344 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 TLE4Q04727 773 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 DHRS2Q13268 280 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 LTC4SQ16873 150 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 C11orf88Q6PI97 169 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 RAB1CQ92928 201 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 C14orf79Q96F83 325 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 TMEM246Q9BRR3 403 aa14.42□□□□□ -0.1
CLDN4-201ENST00000340958 RTBDNQ9BSG5 229 aaPredicted RBP14.42□□□□□ -0.1
CLDN4-201ENST00000340958 CD34P28906 385 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 ERP29P30040 261 aaKnown RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 UBE2MP61081 183 aaKnown RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 MRPS11P82912 194 aaKnown RBP14.41□□□□□ -0.1
CLDN4-201ENST00000340958 PHLDA2Q53GA4 152 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 AVPI1Q5T686 147 aa14.41□□□□□ -0.1
CLDN4-201ENST00000340958 LYG2Q86SG7 212 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms