RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 BIVMQ86UB2 503 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 GDF15Q99988 308 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 A0A0J9YW62 118 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 F2RP25116 425 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 ZNF501Q96CX3 271 aaPredicted RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 SLX1AQ9BQ83 275 aa12.88□□□□□ -0.35
RRP1B-201ENST00000340648 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
RRP1B-201ENST00000340648 IGHMP01871 453 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 B2MP61769 119 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 Q96M66 194 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 TUBD1Q9UJT1 453 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 HRASP01112 189 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 TRGC1P0CF51 173 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 RHOBP62745 196 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 SSMEM1Q8WWF3 244 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 CDIPTO14735 213 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 DEFA4P12838 97 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 BPIFB3P59826 476 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 PSG4Q00888 419 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 M1APQ8TC57 530 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 H0YIZ8 118 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 LINC01387J3KSC0 135 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 ZNF735P0CB33 412 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 IGFBP3P17936 291 aaPredicted RBP12.87□□□□□ -0.35
RRP1B-201ENST00000340648 GNB1P62873 340 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 IGFBP7Q16270 282 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 OR4C5Q8NGB2 326 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 OR4A4PQ8NGN8 299 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 PCGF1Q9BSM1 259 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 DECR2Q9NUI1 292 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 ZNF835Q9Y2P0 537 aa12.87□□□□□ -0.35
RRP1B-201ENST00000340648 A0A1B0GV90 55 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
RRP1B-201ENST00000340648 OR10J1P30954 320 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 HOXA6P31267 233 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 POM121L2Q96KW2 1035 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 NOL4LQ96MY1 436 aaPredicted RBP12.86□□□□□ -0.35
RRP1B-201ENST00000340648 ANGPTL4Q9BY76 406 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 GBF1Q92538 1859 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 MGAMO43451 1857 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 IGKV3-11P04433 115 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 CELA2AP08217 269 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 OR2Z1Q8NG97 314 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 TMEM204Q9BSN7 226 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 M0R1B8 84 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
RRP1B-201ENST00000340648 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 CYC1P08574 325 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 Q6ZN92 141 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 R3HDM4Q96D70 268 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 TBX15Q96SF7 602 aa12.86□□□□□ -0.35
RRP1B-201ENST00000340648 TOX3O15405 576 aaPredicted RBP12.85□□□□□ -0.35
RRP1B-201ENST00000340648 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
RRP1B-201ENST00000340648 HIF1ANQ9NWT6 349 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 K7EQM0 130 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 ZNF253O75346 499 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 GNG10P50151 68 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 SERF2P84101 59 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 C3AR1Q16581 482 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 IZUMO4Q1ZYL8 232 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 TCTEX1D1Q8N7M0 179 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 OR1P1Q8NH06 330 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 SLC45A2Q9UMX9 530 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 RNPS1Q15287 305 aaKnown RBP12.85□□□□□ -0.35
RRP1B-201ENST00000340648 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 SHISA5Q8N114 240 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 LYG1Q8N1E2 194 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 OR5AU1Q8NGC0 362 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 OR1L6Q8NGR2 347 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 VN1R17PQ8TDU5 208 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 E9PQ18 207 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 H0Y980 276 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 LYZL6O75951 148 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 CCL4P13236 92 aa12.85□□□□□ -0.35
RRP1B-201ENST00000340648 MEF2BQ02080 365 aaPredicted RBP12.85□□□□□ -0.35
RRP1B-201ENST00000340648 TP53RKQ96S44 253 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 FGF16O43320 207 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 IER3P46695 156 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 CRIPAKQ8N1N5 446 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 SPRY3O43610 288 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
RRP1B-201ENST00000340648 GAMTQ14353 236 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 BOD1Q96IK1 185 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 CHRDL1Q9BU40 450 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 CNIH1O95406 144 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 IL3RAP26951 378 aa12.84□□□□□ -0.35
RRP1B-201ENST00000340648 GLIPR1P48060 266 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms