RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 PHF1O43189 567 aaPredicted RBP12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 CD40P25942 277 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 GGNBP1Q5YKI7 109 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 ACP7Q6ZNF0 438 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 Q6ZR03 302 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 LILRB1Q8NHL6 650 aaPredicted RBP12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 PHYHIPLQ96FC7 376 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 OR10C1Q96KK4 312 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 PSMG3-AS1Q96PY0 264 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 TMED3Q9Y3Q3 217 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 WIPI2Q9Y4P8 454 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 CADP27708 2225 aa12.79□□□□□ -0.36
TUBB4B-201ENST00000340384 DUXBA0A1W2PPF3 345 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 RPS10-NUDT3A0A1W2PQS6 291 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 BSPH1Q075Z2 132 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 HERPUD1Q15011 391 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 NCMAPQ5T1S8 102 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 WDR82Q6UXN9 313 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 C11orf53Q8IXP5 236 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 H1FOOQ8IZA3 346 aaPredicted RBP12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 OR2Z1Q8NG97 314 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 ST8SIA2Q92186 375 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 MSL2Q9HCI7 577 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 DUSP13Q9UII6 198 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 OR2W1Q9Y3N9 320 aa12.78□□□□□ -0.36
TUBB4B-201ENST00000340384 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 ANKRD34BA5PLL1 514 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 ZNF205O95201 554 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 GNRHRP30968 328 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 S100A10P60903 97 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 NKX6-1P78426 367 aaPredicted RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 IL15RAQ13261 267 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 RAB32Q13637 225 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 PRAMEF6Q5VXH4 476 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 SLC35E4Q6ICL7 350 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 TMEM108Q6UXF1 575 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 LDLRAD3Q86YD5 345 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 PLPPR2Q96GM1 343 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 C18orf12Q96KH6 178 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 SPIN2AQ99865 258 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 SPIN2BQ9BPZ2 258 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 RNF126Q9BV68 326 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 ZNF471Q9BX82 626 aaPredicted RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 SEBOXQ9HB31 216 aaPredicted RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 MBNL3Q9NUK0 354 aaKnown RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 UBE2J1Q9Y385 318 aaPredicted RBP12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 AUP1Q9Y679 476 aa12.77□□□□□ -0.36
TUBB4B-201ENST00000340384 SPDEFO95238 335 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 PTBP3O95758 552 aaKnown RBP12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 COL8A1P27658 744 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 EIF5AP63241 154 aaKnown RBP12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 MSMPQ1L6U9 139 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 C20orf204Q6ZNR8 217 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 PLPPR1Q8TBJ4 325 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 MRPL24Q96A35 216 aaKnown RBP12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 MSI2Q96DH6 328 aaKnown RBP12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 CITED4Q96RK1 184 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.37
TUBB4B-201ENST00000340384 IGLV3-9A0A075B6K5 115 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 A0A1W2PPR1 153 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 ATP6V1G2-DDX39BF2Z307 99 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 PLAUP00749 431 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 RCC1P18754 421 aaPredicted RBP12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 CFHR2P36980 270 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 LUMP51884 338 aaPredicted RBP12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 HMGN3Q15651 99 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 SP6Q3SY56 376 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 ALKAL2Q6UX46 152 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 PPP1R35Q8TAP8 253 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 FAM222BQ8WU58 562 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 LRRC29Q8WV35 223 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 IL22RA2Q969J5 263 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 AKR1E2Q96JD6 320 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 DNTTIP1Q9H147 329 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 SLC25A32Q9H2D1 315 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 UFSP2Q9NUQ7 469 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
TUBB4B-201ENST00000340384 CRYBG3Q68DQ2 2970 aa12.75□□□□□ -0.37
TUBB4B-201ENST00000340384 OOEPA6NGQ2 149 aa12.75□□□□□ -0.37
TUBB4B-201ENST00000340384 SHISA9B4DS77 424 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms