RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 IL19Q9UHD0 177 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 PKD1L2Q7Z442 2459 aa18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 DIDO1Q9BTC0 2240 aaKnown RBP18.79■□□□□ 0.6
PDLIM2-203ENST00000339162 C12orf77C9JDV5 145 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 CYB5R3P00387 301 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 CFHR2P36980 270 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 ADORA2A-AS1P86434 159 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 RAB32Q13637 225 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 HMGN3Q15651 99 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 SLC35E4Q6ICL7 350 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 TMEM65Q6PI78 240 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 LIAT1Q6ZQX7 453 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 PLPPR2Q96GM1 343 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 DCTN5Q9BTE1 182 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 SUCNR1Q9BXA5 334 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 DCAF16Q9NXF7 216 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 MED19A0JLT2 244 aaPredicted RBP18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 LHBP01229 141 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 CHRNB4P30926 498 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 CEACAM6P40199 344 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 TESK1Q15569 626 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 ZNRF1Q8ND25 227 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 C17orf50Q8WW18 174 aa18.78■□□□□ 0.6
PDLIM2-203ENST00000339162 RNF222A6NCQ9 220 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 C4BPBP20851 252 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 OR8H3Q8N146 312 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 KCNIP1Q9NZI2 227 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 OR5AC2Q9NZP5 309 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 ZDHHC8Q9ULC8 765 aa18.77■□□□□ 0.6
PDLIM2-203ENST00000339162 ZNF737O75373 536 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 IFNA21P01568 189 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 GATA4P43694 442 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 S100A10P60903 97 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 DEFB108BQ8NET1 73 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 OR13A1Q8NGR1 328 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 DCUN1D4Q92564 292 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 NGBQ9NPG2 151 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 COQ3Q9NZJ6 369 aa18.77■□□□□ 0.59
PDLIM2-203ENST00000339162 SHISA9B4DS77 424 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 SSTR5P35346 364 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 IL15RAQ13261 267 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 DMRTC2Q8IXT2 367 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 OR10V1Q8NGI7 309 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 VRK1Q99986 396 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 ESRP2Q9H6T0 727 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 FBXO9Q9UK97 447 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 RBM7Q9Y580 266 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 RP2O75695 350 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 HEXAP06865 529 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 SELLP14151 372 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 TNFSF4P23510 183 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 NCMAPQ5T1S8 102 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 RFESDQ8TAC1 157 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 C18orf12Q96KH6 178 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 DNTTIP1Q9H147 329 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 RNF7Q9UBF6 113 aa18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 UBE2J1Q9Y385 318 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-203ENST00000339162 POM121CA8CG34 1229 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 NPIPB11E5RHQ5 1161 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 HBZP02008 142 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 OR8U9P0C7N5 309 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 TMEM268Q5VZI3 342 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 SSX8Q7RTT4 187 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 CMTM1Q8IZ96 169 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 FAM185AQ8N0U4 392 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 LGI3Q8N145 548 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 SLC35G3Q8N808 338 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 OR52L2PQ8NGH6 319 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 OR8U1Q8NH10 309 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 RRNAD1Q96FB5 475 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 PPP1R3CQ9UQK1 317 aa18.75■□□□□ 0.59
PDLIM2-203ENST00000339162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 A0A1B0GW55 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 E7EQL1 145 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 PGLYRP1O75594 196 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L2P0CJ85 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L3P0CJ86 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L4P0CJ87 422 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L5P0CJ88 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L6P0CJ89 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L7P0CJ90 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 IL2RGP31785 369 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 GNMTQ14749 295 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4L9Q6RFH8 374 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 GALMQ96C23 342 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 TMEM222Q9H0R3 208 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 DUX4Q9UBX2 424 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 MAB21L2Q9Y586 359 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 OOEPA6NGQ2 149 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 C17orf100A8MU93 164 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 SNAPC5O75971 98 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 SCGB1D2O95969 90 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 PLAUP00749 431 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 IGLV2-14P01704 120 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 LUMP51884 338 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 RND3P61587 244 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 TLE1Q04724 770 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 LRTM2Q8N967 370 aa18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 INO80EQ8NBZ0 244 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-203ENST00000339162 OR51H1Q8NH63 302 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms