RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RP2O75695 350 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.45
CBX3-201ENST00000337620 VAMP1P23763 118 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 TAS2R31P59538 309 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.45
CBX3-201ENST00000337620 PPP1R1AQ13522 171 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 FCN2Q15485 313 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 AVPI1Q5T686 147 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 ZFAND1Q8TCF1 268 aa12.21□□□□□ -0.45
CBX3-201ENST00000337620 ZNF431Q8TF32 576 aaPredicted RBP12.21□□□□□ -0.45
CBX3-201ENST00000337620 TNFRSF13BO14836 293 aaPredicted RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 HNRNPCP07910 306 aaKnown RBP eCLIP12.2□□□□□ -0.469e-6■■■□□ 17.7
CBX3-201ENST00000337620 TRAPPC2P0DI81 140 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 TRAPPC2BP0DI82 140 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 COX6B1P14854 86 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 GZMHP20718 246 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 ERP29P30040 261 aaKnown RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 CEACAM6P40199 344 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 CD83Q01151 205 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 DHRS2Q13268 280 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 ZNF554Q86TJ5 538 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 SECTM1Q8WVN6 248 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 PLEKHF2Q9H8W4 249 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 OR6C3Q9NZP0 311 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 SPINT2O43291 252 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 PPIHO43447 177 aaKnown RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 NDUFB3O43676 98 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 NDUFA2O43678 99 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 NDUFS7O75251 213 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 TUSC2O75896 110 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 CTSDP07339 412 aaPredicted RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 ZBTB25P24278 435 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 MRPS11P82912 194 aaKnown RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 TMEM128Q5BJH2 165 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 CD276Q5ZPR3 534 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 FAHD2BQ6P2I3 314 aaPredicted RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
CBX3-201ENST00000337620 C14orf79Q96F83 325 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 FAHD2AQ96GK7 314 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 USF3Q68DE3 2245 aa12.2□□□□□ -0.46
CBX3-201ENST00000337620 HEXAP06865 529 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 PLA2G2AP14555 144 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 LTC4SQ16873 150 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 LRRC10Q5BKY1 277 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 LYG2Q86SG7 212 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 RDH8Q9NYR8 311 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 OR2W1Q9Y3N9 320 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 CRYBG3Q68DQ2 2970 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 TRGV10A0A0A0MS01 117 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 IGKV1D-13A0A0B4J2D9 117 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 C9orf170A2RU37 121 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 NPIPB11E5RHQ5 1161 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 C15orf65H3BRN8 121 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 DVL1O14640 695 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 F12P00748 615 aaPredicted RBP12.19□□□□□ -0.46
CBX3-201ENST00000337620 IGHV2-70P01814 119 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 IGKV1-13P0DP09 117 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 UCP3P55916 312 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 PHLDA2Q53GA4 152 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 OR11H7Q8NGC8 314 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 TIMD4Q96H15 378 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 SLC5A7Q9GZV3 580 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 NCOR1P1Q9H4R4 102 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
CBX3-201ENST00000337620 KAAG1Q9UBP8 84 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
CBX3-201ENST00000337620 AKAP6Q13023 2319 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 J3QKU1 62 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 CXCL3P19876 107 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 PIGPP57054 158 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 FAM53AQ6NSI3 398 aaPredicted RBP12.18□□□□□ -0.46
CBX3-201ENST00000337620 LPCAT3Q6P1A2 487 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 C12orf45Q8N5I9 185 aaPredicted RBP12.18□□□□□ -0.46
CBX3-201ENST00000337620 H1FXQ92522 213 aaKnown RBP12.18□□□□□ -0.46
CBX3-201ENST00000337620 RAB1CQ92928 201 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 NINJ1Q92982 152 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 CHODLQ9H9P2 273 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 OR2S2Q9NQN1 319 aa12.18□□□□□ -0.46
CBX3-201ENST00000337620 RBM7Q9Y580 266 aaKnown RBP12.18□□□□□ -0.46
CBX3-201ENST00000337620 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
CBX3-201ENST00000337620 BOLA2-SMG1P6H3BVE0 249 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 FCN3O75636 299 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 OMGP23515 440 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 GNRHRP30968 328 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 EFNA4P52798 201 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 DHODHQ02127 395 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 GNMTQ14749 295 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 OR10V1Q8NGI7 309 aa12.17□□□□□ -0.46
CBX3-201ENST00000337620 PPP1R14BQ96C90 147 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms