RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FAM122AQ96E09 287 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 SLC35E1Q96K37 410 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 RASL10BQ96S79 203 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 DUXBA0A1W2PPF3 345 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 A0A1W2PQF6 199 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF891A8MT65 544 aaPredicted RBP14.04□□□□□ -0.16
NPHP3-201ENST00000337331 PNLIPP16233 465 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 IL11RAQ14626 422 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 DIRC2Q96SL1 478 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 SRD5A3Q9H8P0 318 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 OR10D3Q8NH80 312 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 RFESDQ8TAC1 157 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ASB10Q8WXI3 467 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 AMELYQ99218 206 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 S1PR3Q99500 378 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 SLC35D1Q9NTN3 355 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 MTCH1Q9NZJ7 389 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 KLF4O43474 513 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 SRP19P09132 144 aaKnown RBP14.04□□□□□ -0.16
NPHP3-201ENST00000337331 GALNSP34059 522 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 P2RY6Q15077 328 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 TIGITQ495A1 244 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 CXorf67Q86X51 503 aaPredicted RBP14.04□□□□□ -0.16
NPHP3-201ENST00000337331 POC1AQ8NBT0 407 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF331Q9NQX6 463 aaPredicted RBP14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF355PQ9NSJ1 428 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 LIPT2A6NK58 231 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 MKRN2OSH3BPM6 223 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 ADAM20O43506 726 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 OR10J4P0C629 311 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 DGAT2L6Q6ZPD8 337 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 NAA60Q9H7X0 242 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 HIF1ANQ9NWT6 349 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF391Q9UJN7 358 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 FOXD3Q9UJU5 478 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-201ENST00000337331 A0A1W2PQD3 144 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 FCN1O00602 326 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 DEFA4P12838 97 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 CCL2P13500 99 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 PRDX4Q13162 271 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 HES1Q14469 280 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 PLAC9Q5JTB6 97 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 ROS1P08922 2347 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 DOCK8Q8NF50 2099 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 IGKV1D-16P01601 117 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 SPATA45Q537H7 98 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 PROCRQ9UNN8 238 aa14.03□□□□□ -0.16
NPHP3-201ENST00000337331 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
NPHP3-201ENST00000337331 UBE2L5PA0A1B0GUS4 154 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 GRIFINA4D1Z8 144 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 CCL20P78556 96 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 TMEM267Q0VDI3 215 aaPredicted RBP14.02□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF154Q13106 437 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 OR1C1Q15619 314 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 UBALD2Q8IYN6 164 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 CLDN23Q96B33 292 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 FAM173AQ9BQD7 235 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 WNT5BQ9H1J7 359 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 CNIH1O95406 144 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 CA6P23280 308 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 DTYMKP23919 212 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 IL3RAP26951 378 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 MIEN1Q9BRT3 115 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 ABHD14AQ9BUJ0 271 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 COMMD5Q9GZQ3 224 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 LPAR2Q9HBW0 351 aa14.02□□□□□ -0.16
NPHP3-201ENST00000337331 SLC25A6P12236 298 aa14.02□□□□□ -0.17
NPHP3-201ENST00000337331 EPHA8P29322 1005 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-201ENST00000337331 FOXL2P58012 376 aa14.02□□□□□ -0.17
NPHP3-201ENST00000337331 MGAT2Q10469 447 aa14.02□□□□□ -0.17
NPHP3-201ENST00000337331 PINX1Q96BK5 328 aaKnown RBP14.02□□□□□ -0.17
NPHP3-201ENST00000337331 ANXA10Q9UJ72 324 aa14.02□□□□□ -0.17
NPHP3-201ENST00000337331 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-201ENST00000337331 HLA-GP17693 338 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 SPINK2P20155 84 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 MPZP25189 248 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 OR1L6Q8NGR2 347 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 SPTAN1Q13813 2472 aaKnown RBP14.01□□□□□ -0.17
NPHP3-201ENST00000337331 SHISA7A6NL88 538 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 RRP8O43159 456 aaKnown RBP14.01□□□□□ -0.17
NPHP3-201ENST00000337331 ERGP11308 486 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 MMDQ15546 238 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 SMIM21Q3B7S5 101 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 OR13G1Q8NGZ3 307 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 MESP1Q9BRJ9 268 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 NBASA2RRP1 2371 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 HSBP1O75506 76 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 NGFP01138 241 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 CD33P20138 364 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 SUB1P53999 127 aaKnown RBP eCLIP14.01□□□□□ -0.17
NPHP3-201ENST00000337331 UBE2G1P62253 170 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 RPL24P83731 157 aaKnown RBP14.01□□□□□ -0.17
NPHP3-201ENST00000337331 GGTLC2Q14390 218 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 DCAF10Q5QP82 559 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 NUDT11Q96G61 164 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 ESPL1Q14674 2120 aa14.01□□□□□ -0.17
NPHP3-201ENST00000337331 DOPEY2Q9Y3R5 2298 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms