RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 FAM90A16PA6NEW6 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A20PA6NIJ5 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A8PA6NJQ4 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A7PA6NKC0 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A22PA8MWA6 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A12PA8MX19 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A5PA8MXJ8 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A23PA8MXZ1 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A15PP0C7V4 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A13PP0C7W8 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A14PP0C7W9 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FAM90A24PP0C7X0 464 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 Q6ZRM9 215 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 CRIM1Q9NZV1 1036 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 OR14J1Q9UGF5 321 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 CD55P08174 381 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 CPEB3Q8NE35 698 aaKnown RBP20.17■□□□□ 0.82
TSKU-201ENST00000333090 Q8NFD4 153 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 OR4X1Q8NH49 305 aa20.17■□□□□ 0.82
TSKU-201ENST00000333090 FGF23Q9GZV9 251 aaPredicted RBP20.17■□□□□ 0.82
TSKU-201ENST00000333090 CHD3Q12873 2000 aaKnown RBP20.16■□□□□ 0.82
TSKU-201ENST00000333090 S100GP29377 79 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 ARL16Q0P5N6 197 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 PRDX4Q13162 271 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 ADIRFQ15847 76 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 OR10A7Q8NGE5 316 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 PLK3Q9H4B4 646 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 KIAA1324LA8MWY0 1029 aaPredicted RBP20.16■□□□□ 0.82
TSKU-201ENST00000333090 C9J4A7 227 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 CTXN2P0C2S0 81 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 TLE1Q04724 770 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 SRSF7Q16629 238 aaKnown RBP eCLIP20.16■□□□□ 0.82
TSKU-201ENST00000333090 WDR25Q64LD2 544 aaPredicted RBP20.16■□□□□ 0.82
TSKU-201ENST00000333090 GPR87Q9BY21 358 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 RBKSQ9H477 322 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 GPR35Q9HC97 309 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 MTCH1Q9NZJ7 389 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 CACNG5Q9UF02 275 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 GAB2Q9UQC2 676 aa20.16■□□□□ 0.82
TSKU-201ENST00000333090 IFNA10P01566 189 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 SPINK2P20155 84 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 ELLP55199 621 aaPredicted RBP20.15■□□□□ 0.82
TSKU-201ENST00000333090 SLC23A3Q6PIS1 610 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 C20orf204Q6ZNR8 217 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 NECAP1Q8NC96 275 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 MBD3L1Q8WWY6 194 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 SPSB4Q96A44 273 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 C1QTNF5Q9BXJ0 243 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 CDH20Q9HBT6 801 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 VAX2Q9UIW0 290 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 A0A0G2JMM0 328 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 A0A1W2PPB8 328 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 A0A1W2PRS3 328 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 KIR3DP1A8MWS1 328 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 TUBG1P23258 451 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 MDH2P40926 338 aaKnown RBP20.15■□□□□ 0.82
TSKU-201ENST00000333090 PCSK4Q6UW60 755 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 DMRTC2Q8IXT2 367 aaPredicted RBP20.15■□□□□ 0.82
TSKU-201ENST00000333090 IMMP1LQ96LU5 166 aa20.15■□□□□ 0.82
TSKU-201ENST00000333090 CCL2P13500 99 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 RPS19BP1Q86WX3 136 aaKnown RBP20.14■□□□□ 0.82
TSKU-201ENST00000333090 TMEM183AQ8IXX5 376 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 LILRB2Q8N423 598 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 ZNF525Q8N782 197 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 OR5R1Q8NH85 324 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 POM121Q96HA1 1249 aa20.14■□□□□ 0.82
TSKU-201ENST00000333090 ERRFI1Q9UJM3 462 aaPredicted RBP20.14■□□□□ 0.82
TSKU-201ENST00000333090 KIAA2026Q5HYC2 2103 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 LOC102723996A0A087X1L8 192 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 UMODP07911 640 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 COX6A1P12074 109 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 NDUFB7P17568 137 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 B3GALT5-AS1P59052 145 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 BEND4Q6ZU67 534 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 GGNQ86UU5 652 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 P2RX4Q99571 388 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 SMIM7Q9BQ49 75 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 PSENENQ9NZ42 101 aa20.14■□□□□ 0.81
TSKU-201ENST00000333090 MAP1LC3B2A6NCE7 125 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 TRAPPC2LH3BP13 241 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 DNPH1O43598 174 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 SYNGR2O43760 224 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 HNF4GQ14541 408 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 RNPS1Q15287 305 aaKnown RBP20.13■□□□□ 0.81
TSKU-201ENST00000333090 MRGPRGQ86SM5 289 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 IL1F10Q8WWZ1 152 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 DNASE2BQ8WZ79 361 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 MAP1LC3BQ9GZQ8 125 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 CTDSP1Q9GZU7 261 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 RNF150Q9ULK6 438 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 OR2W1Q9Y3N9 320 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 HS3ST1O14792 307 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 SLC31A2O15432 143 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 MMP7P09237 267 aaPredicted RBP20.13■□□□□ 0.81
TSKU-201ENST00000333090 OR10D3Q8NH80 312 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 OR10J5Q8NHC4 309 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 RDH5Q92781 318 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 SH2D2AQ9NP31 389 aa20.13■□□□□ 0.81
TSKU-201ENST00000333090 COL10A1Q03692 680 aa20.12■□□□□ 0.81
TSKU-201ENST00000333090 C9orf135Q5VTT2 229 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms