RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 ZNF818PQ6ZRF7 136 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 MRGPRGQ86SM5 289 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 OR2AE1Q8NHA4 323 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF845Q96IR2 970 aaPredicted RBP15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 RBKSQ9H477 322 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 PLSCR2Q9NRY7 297 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 TAAR3PQ9P1P4 343 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 PRSS50Q9UI38 385 aa15.54■□□□□ 0.08
CLSTN3-202ENST00000331148 FER1L5A0AVI2 2057 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 SPEGQ15772 3267 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 KIR2DL5BA0A0G2JN68 375 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 KIR2DL5BA0A0G2JPC4 375 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 TLX3O43711 291 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 MALLQ13021 153 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM211Q6ICI0 200 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 KIR2DL5AQ8N109 375 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 THOC3Q96J01 351 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 OR5B12Q96R08 314 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 PCGF1Q9BSM1 259 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 OCIAD1Q9NX40 245 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 MYOTQ9UBF9 498 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 ST3GAL6Q9Y274 331 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 WDFY4Q6ZS81 3184 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 FRYLO94915 3013 aa15.53■□□□□ 0.08
CLSTN3-202ENST00000331148 ASCC3Q8N3C0 2202 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM210A6NLX4 147 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 H7BYZ3 331 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 TNFSF12O43508 249 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 IFNA1P01562 189 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 UCP1P25874 307 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 DCAF10Q5QP82 559 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 C1orf194Q5T5A4 169 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 ZNF295-AS1Q8N0V1 137 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 GAPTQ8N292 157 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 TMEM37Q8WXS4 190 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 NABP1Q96AH0 204 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 BORCS8Q96FH0 119 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 ELOVL1Q9BW60 279 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 FUT9Q9Y231 359 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 SHANK1Q9Y566 2161 aa15.52■□□□□ 0.08
CLSTN3-202ENST00000331148 METTL15P1P0C7V9 234 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 HIST1H3AP68431 136 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 TRA2AQ13595 282 aaKnown RBP eCLIP15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 HERPUD1Q15011 391 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 TMEM241Q24JQ0 296 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 BSXQ3C1V8 233 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 PHYHD1Q5SRE7 291 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 SCGB1C1Q8TD33 95 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 ZNF442Q9H7R0 627 aa15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 POLR3KQ9Y2Y1 108 aaPredicted RBP15.52■□□□□ 0.07
CLSTN3-202ENST00000331148 IGLV3-12A0A075B6K2 115 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 AQP7P3A6NL99 342 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 HRASP01112 189 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 PRSS12P56730 875 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 GNB2P62879 340 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 LHFPL2Q6ZUX7 228 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 CENPVQ7Z7K6 275 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 TMEM208Q9BTX3 173 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 RNF150Q9ULK6 438 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 R4GN57 208 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 IFNL4K9M1U5 179 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 KBTBD11O94819 623 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 TCN2P20062 427 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 RPL23P62829 140 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 IL11RAQ14626 422 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 C21orf62-AS1Q17RA5 79 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 CLEC12BQ2HXU8 276 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 ACOT6Q3I5F7 207 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 ACSF3Q4G176 576 aaPredicted RBP15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 PLA2G2CQ5R387 149 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 GBGT1Q8N5D6 347 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 SPTSSAQ969W0 71 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 FKBP11Q9NYL4 201 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 PLEK2Q9NYT0 353 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 CBY1Q9Y3M2 126 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 DMDP11532 3685 aa15.51■□□□□ 0.07
CLSTN3-202ENST00000331148 LNP1A1A4G5 178 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 MAP1LC3B2A6NCE7 125 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 PRR33A8MZF0 331 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 DLEU1O43261 78 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 ACP1P24666 158 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 MDH2P40926 338 aaKnown RBP15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 ELLP55199 621 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 C10orf128Q5T292 105 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 RNF138Q8WVD3 245 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 PSMG3Q9BT73 122 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 COL25A1Q9BXS0 654 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 MAP1LC3BQ9GZQ8 125 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 GOLT1BQ9Y3E0 138 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 LRRC3CA6NJW4 275 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 SCGB1D1O95968 90 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 MSX1P28360 303 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 RTP5Q14D33 572 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 FOXL2NBQ6ZUU3 175 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 AGBL5Q8NDL9 886 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 OR5D13Q8NGL4 314 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 IL36GQ9NZH8 169 aa15.5■□□□□ 0.07
CLSTN3-202ENST00000331148 IGKV1D-13A0A0B4J2D9 117 aa15.49■□□□□ 0.07
CLSTN3-202ENST00000331148 ZNF737O75373 536 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms