RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 A0A1B0GW64 132 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 AQP7P3A6NL99 342 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 PDCD6O75340 191 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 HBE1P02100 147 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 FGF7P21781 194 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 C16orf82Q7Z2V1 217 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 OR2M3Q8NG83 312 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 OR10A7Q8NGE5 316 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 EXTL1Q92935 676 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 RBMXL1Q96E39 390 aaKnown RBP6.78□□□□□ -1.32
VMA21-201ENST00000330374 ATP5SQ99766 215 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 ANGPTL4Q9BY76 406 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 AKIRIN1Q9H9L7 192 aaPredicted RBP6.78□□□□□ -1.32
VMA21-201ENST00000330374 CBLN4Q9NTU7 201 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 FREM1Q5H8C1 2179 aa6.77□□□□□ -1.32
VMA21-201ENST00000330374 A0A1B0GU03 582 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 BCAT2O15382 392 aaPredicted RBP6.77□□□□□ -1.33
VMA21-201ENST00000330374 CDS2O95674 445 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 BCL2P10415 239 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 PLXDC1Q8IUK5 500 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 PCGF1Q9BSM1 259 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 RBKSQ9H477 322 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 PITPNC1Q9UKF7 332 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 TNFSF11O14788 317 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 DUX1O43812 170 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 SCGB1D1O95968 90 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 CYB5R3P00387 301 aaPredicted RBP6.77□□□□□ -1.33
VMA21-201ENST00000330374 TAS2R30P59541 319 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 OR8G2PQ6IF36 304 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 ZNF611Q8N823 705 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 DDA1Q9BW61 102 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 FUT9Q9Y231 359 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 OR4A8P0C604 315 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 CCL2P13500 99 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 PTGDSP41222 190 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 CCR5P51681 352 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 ZNF92Q03936 586 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 RAB30Q15771 203 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 HLA-BQ31612 363 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 PLA2G2CQ5R387 149 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 OR6C1Q96RD1 312 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 CDC42EP3Q9UKI2 254 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 RBM7Q9Y580 266 aaKnown RBP6.77□□□□□ -1.33
VMA21-201ENST00000330374 MTCH2Q9Y6C9 303 aa6.77□□□□□ -1.33
VMA21-201ENST00000330374 ZNF32P17041 273 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 H3F3AP84243 136 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 NCR3LG1Q68D85 454 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 TSTD1Q8NFU3 115 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 OR1P1Q8NH06 330 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SPSB1Q96BD6 273 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 Q9N2K0 584 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 R4GN57 208 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 A0A1B0GUS0 222 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 A8MWP6 167 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 ZNF732B4DXR9 585 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 HS3ST1O14792 307 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 CA11O75493 328 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SERPINE2P07093 398 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 DEFA4P12838 97 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 NFAM1Q8NET5 270 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 OR13D1Q8NGV5 346 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SPSB4Q96A44 273 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 ZNF501Q96CX3 271 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 DKKL1Q9UK85 242 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 IGHV3-64DA0A0J9YX35 117 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 PPP5D1E7EU14 171 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 RPL36A-HNRNPH2H7BZ11 118 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 GDF9O60383 454 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 ZNF726P1Q15940 193 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 TMEM183AQ8IXX5 376 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 GATAD1Q8WUU5 269 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SIGLEC12Q96PQ1 595 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 RASL10BQ96S79 203 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SDF2L1Q9HCN8 221 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 H7BYZ3 331 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 ZFAND5O76080 213 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 PSG2P11465 335 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 BCL3P20749 454 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 BATFQ16520 125 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 HIST3H3Q16695 136 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 MAML2Q8IZL2 1156 aaPredicted RBP6.76□□□□□ -1.33
VMA21-201ENST00000330374 OR5L2Q8NGL0 311 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 RDH5Q92781 318 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 LHX4Q969G2 390 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 OR5B12Q96R08 314 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 OR51B6Q9H340 312 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 SLC25A22Q9H936 323 aa6.76□□□□□ -1.33
VMA21-201ENST00000330374 UBE2L5PA0A1B0GUS4 154 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 MAP1LC3B2A6NCE7 125 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 SLC22A20A6NK97 555 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 IGLV3-1P01715 115 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 GZMHP20718 246 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 VDAC1P21796 283 aa6.75□□□□□ -1.33
VMA21-201ENST00000330374 GALR1P47211 349 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms