RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MRPL37Q9BZE1 423 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 B4GALT7Q9UBV7 327 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 TP53TG5Q9Y2B4 290 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 SYNGR4O95473 234 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 GZMBP10144 247 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 ATP6V0CP27449 155 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 G0S2P27469 103 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 PMP22Q01453 160 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 TMEM187Q14656 261 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 LFNGQ8NES3 379 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 NEK7Q8TDX7 302 aa13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 UNKLQ9H9P5 680 aaKnown RBP13.34□□□□□ -0.27
SHROOM1-201ENST00000319854 A0A1B0GWJ7 208 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 IL18BPO95998 194 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 CTSDP07339 412 aaPredicted RBP13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 P4HA3Q7Z4N8 544 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 MCEMP1Q8IX19 187 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 FAM210BQ96KR6 192 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 SMCO3A2RU48 225 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 SFTPCP11686 197 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 OMGP23515 440 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 OR5L1Q8NGL2 311 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 TVP23CQ96ET8 276 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 ANXA10Q9UJ72 324 aa13.33□□□□□ -0.28
SHROOM1-201ENST00000319854 SCAF4O95104 1147 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 FUT3P21217 361 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 CLDN18P56856 261 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 NUTF2P61970 127 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 FAM189A2Q15884 450 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 DNLZQ5SXM8 178 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 GPR157Q5UAW9 335 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 NUFIP2Q7Z417 695 aaKnown RBP13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 ZNF488Q96MN9 340 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 hCG_38984A0A1B0GV85 526 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 MEOX1P50221 254 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 PCBD1P61457 104 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 OR11L1Q8NGX0 322 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 ABI3Q9P2A4 366 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 PRSS50Q9UI38 385 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 HSF4Q9ULV5 492 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 WSB1Q9Y6I7 421 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 DNPH1O43598 174 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 EWSR1Q01844 656 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 FBXW12Q6X9E4 464 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 TMEM171Q8WVE6 324 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 ZPBPQ9BS86 351 aa13.32□□□□□ -0.28
SHROOM1-201ENST00000319854 ROS1P08922 2347 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 MMP7P09237 267 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 ABCA11PQ4W5N1 156 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 OR5R1Q8NH85 324 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 TM2D1Q9BX74 207 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 FAM86C1Q9NVL1 165 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 SP5Q6BEB4 398 aaPredicted RBP13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 MRPL21Q7Z2W9 205 aaKnown RBP13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 GCNT2Q8N0V5 402 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 APH1AQ96BI3 265 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 DDA1Q9BW61 102 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 SPRY4Q9C004 299 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 CADP27708 2225 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 ATMQ13315 3056 aa13.31□□□□□ -0.28
SHROOM1-201ENST00000319854 LILRA1O75019 489 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 NUBP1P53384 320 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 JOSD1Q15040 202 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 ZNF880Q6PDB4 577 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 OR13D1Q8NGV5 346 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 RTN4IP1Q8WWV3 396 aaPredicted RBP13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 SMDT1Q9H4I9 107 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 AMBPP02760 352 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 EPHA1P21709 976 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 CEACAM6P40199 344 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 ALDH3B1P43353 468 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 ARG2P78540 354 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 RUNX1Q01196 453 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 LHFPL2Q6ZUX7 228 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 SUMF1Q8NBK3 374 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 NDUFAF3Q9BU61 184 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 SIRT7Q9NRC8 400 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 IGSF23A1L1A6 192 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 SOX15O60248 233 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 WISP2O76076 250 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 BCL3P20749 454 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 CD81P60033 236 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 BOD1Q96IK1 185 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 NAA60Q9H7X0 242 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 KIAA1456Q9P272 454 aa13.3□□□□□ -0.28
SHROOM1-201ENST00000319854 ESPL1Q14674 2120 aa13.29□□□□□ -0.28
SHROOM1-201ENST00000319854 ST8SIA3O43173 380 aa13.29□□□□□ -0.28
SHROOM1-201ENST00000319854 MALLQ13021 153 aa13.29□□□□□ -0.28
SHROOM1-201ENST00000319854 LBHQ53QV2 105 aaPredicted RBP13.29□□□□□ -0.28
SHROOM1-201ENST00000319854 RIPPLY2Q5TAB7 128 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms