RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 Q6ZSR3 168 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 CALHM1Q8IU99 346 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 FGFBP3Q8TAT2 258 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 HS3ST6Q96QI5 342 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 DEFB126Q9BYW3 111 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 ASCL3Q9NQ33 180 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
CRAT-201ENST00000318080 DLEU1O43261 78 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 PPYP01298 95 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 CRYGSP22914 178 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 SLC35E3Q7Z769 313 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 SPTSSAQ969W0 71 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 PCGF1Q9BSM1 259 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 SLC7A10Q9NS82 523 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 LOC102723971A0A1B0GUV8 181 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 LOC102725191A0A1B0GVB3 256 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 TNFSF11O14788 317 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 RPL29P47914 159 aaKnown RBP13.74□□□□□ -0.21
CRAT-201ENST00000318080 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
CRAT-201ENST00000318080 VAMP2P63027 116 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 TBC1D26Q86UD7 250 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 SYT3Q9BQG1 590 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 SRXN1Q9BYN0 137 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 ZNF286AQ9HBT8 521 aa13.74□□□□□ -0.21
CRAT-201ENST00000318080 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
CRAT-201ENST00000318080 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 TRDCB7Z8K6 153 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 CHST1O43916 411 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 OR7C1O76099 320 aaPredicted RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 NRASP01111 189 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 CEACAM6P40199 344 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 HERV-K104P61576 105 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 EIF3IQ13347 325 aaKnown RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 ZNF266Q14584 549 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 SLC25A24Q6NUK1 477 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 C16orf82Q7Z2V1 217 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 CPEB3Q8NE35 698 aaKnown RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 OR13D1Q8NGV5 346 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 ZNF442Q9H7R0 627 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 AURKAIP1Q9NWT8 199 aaPredicted RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 CCL3P10147 92 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 B4GALT1P15291 398 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 PAX5Q02548 391 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 OR10A7Q8NGE5 316 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 IFI44Q8TCB0 444 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 TMEM222Q9H0R3 208 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 OR51B6Q9H340 312 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 RPRMQ9NS64 109 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 FUT9Q9Y231 359 aa13.73□□□□□ -0.21
CRAT-201ENST00000318080 UBE2J1Q9Y385 318 aaPredicted RBP13.73□□□□□ -0.21
CRAT-201ENST00000318080 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 A0A0J9YW62 118 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 HSPB6O14558 160 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 DVL1O14640 695 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 SYNGR3O43761 229 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 CER1O95813 267 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 MRPS11P82912 194 aaKnown RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 ZNF92Q03936 586 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 BATFQ16520 125 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 SP5Q6BEB4 398 aaPredicted RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 ZNF818PQ6ZRF7 136 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 FOXL2NBQ6ZUU3 175 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 PIGCQ92535 297 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 ALKBH3Q96Q83 286 aaPredicted RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 DUSP23Q9BVJ7 150 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 CDH20Q9HBT6 801 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 DCHS1Q96JQ0 3298 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 A0A1W2PPQ1 181 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 ZIC3O60481 467 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 PITX3O75364 302 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 SCGB1D1O95968 90 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 TIPARPQ7Z3E1 657 aaKnown RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 SELENOHQ8IZQ5 122 aaKnown RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 FAM185AQ8N0U4 392 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 RPUSD4Q96CM3 377 aaKnown RBP13.72□□□□□ -0.21
CRAT-201ENST00000318080 IL36RNQ9UBH0 155 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 ADAMTS20P59510 1910 aa13.72□□□□□ -0.21
CRAT-201ENST00000318080 HSPA12AO43301 675 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 CYB5R3P00387 301 aaPredicted RBP13.71□□□□□ -0.21
CRAT-201ENST00000318080 SCTP09683 121 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 ZNF32P17041 273 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 WDR74Q6RFH5 385 aaPredicted RBP13.71□□□□□ -0.21
CRAT-201ENST00000318080 RABEPKQ7Z6M1 372 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 ZNF695Q8IW36 515 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 GAPTQ8N292 157 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 RAB24Q969Q5 203 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 RCC1LQ96I51 464 aaKnown RBP13.71□□□□□ -0.21
CRAT-201ENST00000318080 PLEKHF2Q9H8W4 249 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 PROK2Q9HC23 129 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.21
CRAT-201ENST00000318080 KNTC1P50748 2209 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
CRAT-201ENST00000318080 BMP5P22003 454 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms