RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 WIPI2Q9Y4P8 454 aa4.11□□□□□ -1.75
PTPN13-201ENST00000316707 LRRC3CA6NJW4 275 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 FAM166BA8MTA8 275 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF814B7Z6K7 855 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 MMP7P09237 267 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 G0S2P27469 103 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CATR1Q13166 79 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PLCXD3Q63HM9 321 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PARM1Q6UWI2 310 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SFTPA2Q8IWL1 248 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR2M3Q8NG83 312 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR4C12Q96R67 309 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM9BQ9NQ34 198 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 RBM7Q9Y580 266 aaKnown RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CNTRLQ7Z7A1 2325 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ANAPC1Q9H1A4 1944 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TRBV9A0A0B4J1U6 114 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TRAPPC2LH3BP13 241 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PAX9P55771 341 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 NKAIN1Q4KMZ8 207 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM240Q5SV17 173 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM14EPQ6UXP3 125 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 UNQ6494/PRO21346Q6UXR6 183 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF818PQ6ZRF7 136 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 NFAM1Q8NET5 270 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 LMX1AQ8TE12 382 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 NABP1Q96AH0 204 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 VAMP8Q9BV40 100 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TAAR3PQ9P1P4 343 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 A0A0U1RQK1 487 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 hCG_38984A0A1B0GV85 526 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF320A2RRD8 509 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ITGB1BP1O14713 200 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TNFSF11O14788 317 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CELA2BP08218 269 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CD27P26842 260 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SOX8P57073 446 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 WDR73Q6P4I2 378 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR10P1Q8NGE3 313 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR10G9Q8NGN4 311 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR10G7Q8NGN6 311 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR10J5Q8NHC4 309 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PLA2G2FQ9BZM2 168 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CACNA1IQ9P0X4 2223 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 DENND4AQ7Z401 1863 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 MPDU1O75352 247 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SNRPCP09234 159 aaKnown RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 FGF12P61328 243 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 RAC1P63000 192 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TEX38Q6PEX7 206 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 RPP25LQ8N5L8 163 aaKnown RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ZNF611Q8N823 705 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OR2AE1Q8NHA4 323 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM204Q9BSN7 226 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 MYO7AQ13402 2215 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 IGHV1OR21-1A0A087WYE8 117 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 IGKV1-12A0A0C4DH73 117 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 KIAA1324LA8MWY0 1029 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 IGKV1D-12P01611 117 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 KITLGP21583 273 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CD38P28907 300 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SAPCD1Q5SSQ6 148 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 RSG1Q9BU20 258 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PARD6AQ9NPB6 346 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 LY96Q9Y6Y9 160 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 C20orf202A1L168 122 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SLC33A1O00400 549 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 CBR3O75828 277 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 IL18BPO95998 194 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ATXN8OSP0DMR3 200 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 ERVS71-1P61550 626 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SELENOTP62341 195 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 TEX43Q6ZNM6 134 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 SPSB4Q96A44 273 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PRDM14Q9GZV8 571 aa4.1□□□□□ -1.75
PTPN13-201ENST00000316707 OPN3Q9H1Y3 402 aaPredicted RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 PATZ1Q9HBE1 687 aaKnown RBP4.1□□□□□ -1.75
PTPN13-201ENST00000316707 H3BP45 60 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 ANKRD37Q7Z713 158 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 OR5AU1Q8NGC0 362 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 PSMF1Q92530 271 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 RELTQ969Z4 430 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 UQCR10Q9UDW1 63 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 TRBV11-1A0A0K0K1C0 115 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 SHISA7A6NL88 538 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 H3BMH7 237 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 HS3ST1O14792 307 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 CRISP2P16562 243 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 EPHA8P29322 1005 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 RSPO1Q2MKA7 263 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 PIGYQ3MUY2 71 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 FAM78BQ5VT40 261 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM144Q7Z5S9 345 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 PLPPR1Q8TBJ4 325 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 SAMD10Q9BYL1 202 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.09□□□□□ -1.75
PTPN13-201ENST00000316707 TMEM38BQ9NVV0 291 aa4.09□□□□□ -1.75
PTPN13-201ENST00000316707 IL17BQ9UHF5 180 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms