RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SAPCD1Q5SSQ6 148 aa15.52■□□□□ 0.08
SPSB4-201ENST00000310546 ZNF160Q9HCG1 818 aa15.52■□□□□ 0.08
SPSB4-201ENST00000310546 PNRC2Q9NPJ4 139 aaKnown RBP15.52■□□□□ 0.08
SPSB4-201ENST00000310546 ZFP30Q9Y2G7 519 aa15.52■□□□□ 0.08
SPSB4-201ENST00000310546 DOCK11Q5JSL3 2073 aa15.52■□□□□ 0.08
SPSB4-201ENST00000310546 UMODP07911 640 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 DTYMKP23919 212 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 FBXW4P57775 412 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 RPS18P62269 152 aaKnown RBP15.52■□□□□ 0.07
SPSB4-201ENST00000310546 SRPXP78539 464 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 SELENOHQ8IZQ5 122 aaKnown RBP15.52■□□□□ 0.07
SPSB4-201ENST00000310546 SIGLEC12Q96PQ1 595 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 SPTBN2O15020 2390 aa15.52■□□□□ 0.07
SPSB4-201ENST00000310546 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 TSPAN2O60636 221 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 LILRA1O75019 489 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 TRAPPC6AO75865 159 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 KBTBD11O94819 623 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 IFNA1P01562 189 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 BLKP51451 505 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 MEF2BQ02080 365 aaPredicted RBP15.51■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM41BQ5BJD5 291 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 COL5A1-AS1Q5SY13 56 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 PLPPR1Q8TBJ4 325 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 ZNF721Q8TF20 911 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 MRGPRX4Q96LA9 322 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 TRAPPC1Q9Y5R8 145 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 IGHV5-51A0A0C4DH38 117 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 DHRS3O75911 302 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 CHRNB4P30926 498 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 CHRNA7P36544 502 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 RBX1P62877 108 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 ID3Q02535 119 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 C16orf47Q6ZP98 133 aaPredicted RBP15.51■□□□□ 0.07
SPSB4-201ENST00000310546 TIPARPQ7Z3E1 657 aaKnown RBP15.51■□□□□ 0.07
SPSB4-201ENST00000310546 CISD2Q8N5K1 135 aaKnown RBP15.51■□□□□ 0.07
SPSB4-201ENST00000310546 C22orf15Q8WYQ4 148 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 LHX4Q969G2 390 aa15.51■□□□□ 0.07
SPSB4-201ENST00000310546 MRPL13Q9BYD1 178 aaKnown RBP15.51■□□□□ 0.07
SPSB4-201ENST00000310546 A0A1W2PQD3 144 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 A0A1W2PR77 199 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 A0A1W2PR80 420 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 BLACEA4D250 179 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM150CB9EJG8 249 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 PAX9P55771 341 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 NUFIP2Q7Z417 695 aaKnown RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 SPEM1Q8N4L4 309 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM234Q8WY98 164 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 EXTL1Q92935 676 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 PARLQ9H300 379 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 TNFSF13O75888 250 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 IGKV3-11P04433 115 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 MDH2P40926 338 aaKnown RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 SHISA6Q6ZSJ9 500 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 MYPOPQ86VE0 399 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 CPEB3Q8NE35 698 aaKnown RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 VN1R17PQ8TDU5 208 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 GPR35Q9HC97 309 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 RIF1Q5UIP0 2472 aaKnown RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 A0A0U1RQK1 487 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 C20orf202A1L168 122 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 ZNF320A2RRD8 509 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 GRIFINA4D1Z8 144 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 IGHG1P01857 330 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 MLF1P58340 268 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 BATF2Q8N1L9 274 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 MBD3L1Q8WWY6 194 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 ZNF845Q96IR2 970 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 RASL10BQ96S79 203 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 SLC7A10Q9NS82 523 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM106BQ9NUM4 274 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 AURKAIP1Q9NWT8 199 aaPredicted RBP15.5■□□□□ 0.07
SPSB4-201ENST00000310546 B3GAT1Q9P2W7 334 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 LAMA5O15230 3695 aa15.5■□□□□ 0.07
SPSB4-201ENST00000310546 FAM78BQ5VT40 261 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 SLC25A45Q8N413 288 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 PP6455Q8WZ26 134 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 VAMP8Q9BV40 100 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 AHCTF1Q8WYP5 2266 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM183BQ1AE95 376 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 IZUMO4Q1ZYL8 232 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 MRPL52Q86TS9 123 aaKnown RBP15.49■□□□□ 0.07
SPSB4-201ENST00000310546 MRPL30Q8TCC3 161 aaKnown RBP15.49■□□□□ 0.07
SPSB4-201ENST00000310546 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.49■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM56Q96MV1 263 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 C20orf144Q9BQM9 153 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 PATZ1Q9HBE1 687 aaKnown RBP15.49■□□□□ 0.07
SPSB4-201ENST00000310546 KLHL13Q9P2N7 655 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 TMEM56-RWDD3S4R434 201 aa15.49■□□□□ 0.07
SPSB4-201ENST00000310546 PTTG1IPP53801 180 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 MMDQ15546 238 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 OR4F5Q8NH21 305 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 OR4F4Q96R69 305 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 MANBALQ9NQG1 85 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 SLC39A9Q9NUM3 307 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 RNF115Q9Y4L5 304 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 DMXL1Q9Y485 3027 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 CNOT1A5YKK6 2376 aaKnown RBP15.48■□□□□ 0.07
SPSB4-201ENST00000310546 LOC400499M0QZD8 3231 aa15.48■□□□□ 0.07
SPSB4-201ENST00000310546 A0A1W2PNV4 684 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms