RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 OR10D4PQ8NGN7 298 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 OR2V1Q8NHB1 315 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 MRPL30Q8TCC3 161 aaKnown RBP4.61□□□□□ -1.67
VPS50-202ENST00000305866 TMEM170AQ8WVE7 144 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 APOBEC3DQ96AK3 386 aaPredicted RBP4.61□□□□□ -1.67
VPS50-202ENST00000305866 TMEM68Q96MH6 324 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 PSMG3Q9BT73 122 aaPredicted RBP4.61□□□□□ -1.67
VPS50-202ENST00000305866 DEFB126Q9BYW3 111 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 SRD5A3Q9H8P0 318 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 HES4Q9HCC6 221 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 ZNF160Q9HCG1 818 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 RPRMQ9NS64 109 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 AURKAIP1Q9NWT8 199 aaPredicted RBP4.61□□□□□ -1.67
VPS50-202ENST00000305866 IL36RNQ9UBH0 155 aa4.61□□□□□ -1.67
VPS50-202ENST00000305866 LSM5Q9Y4Y9 91 aaKnown RBP4.61□□□□□ -1.67
VPS50-202ENST00000305866 TRBV20OR9-2A0A075B6H5 130 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF816-ZNF321PA0A0X1KG74 233 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 A0A1W2PNR3 127 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 FAM221AA4D161 298 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 KNG1P01042 644 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 DUSP3P51452 185 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 FREM1Q5H8C1 2179 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 BRICD5Q6PL45 260 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 DCHS2Q6V1P9 2916 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TBC1D26Q86UD7 250 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TGIF2LYQ8IUE0 185 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TVP23CQ96ET8 276 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 FAM71F1Q96KD3 344 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 S100A13Q99584 98 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 METTL8Q9H825 291 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 UNKLQ9H9P5 680 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 PIGLQ9Y2B2 252 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 SSUH2Q9Y2M2 353 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ANGPTL7O43827 346 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 SERPINA7P05543 415 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CTXN2P0C2S0 81 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF14P17017 642 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 CD200P41217 278 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 NUBP1P53384 320 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CLDN18P56856 261 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 MRPS11P82912 194 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 IL24Q13007 206 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CEACAM21Q3KPI0 293 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TMEM14EPQ6UXP3 125 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 H1FOOQ8IZA3 346 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 OSR2Q8N2R0 312 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CPEB3Q8NE35 698 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 LSM10Q969L4 123 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 PGAM5Q96HS1 289 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 P2RX4Q99571 388 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ATP5SQ99766 215 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ELOVL1Q9BW60 279 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 PLK3Q9H4B4 646 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 PLEKHF2Q9H8W4 249 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 AKIRIN1Q9H9L7 192 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 SLC7A10Q9NS82 523 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CENPMQ9NSP4 180 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 GSKIPQ9P0R6 139 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF407Q9C0G0 2248 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF891A8MT65 544 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 H0Y980 276 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 IFNA17P01571 189 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF728P0DKX0 622 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 BCL2P10415 239 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 FCGR2AP12318 317 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TUBG1P23258 451 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 GABRR1P24046 479 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 TDGF1P3P51864 188 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 SELENOTP62341 195 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 RPL23P62829 140 aaKnown RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 HLA-DRB3P79483 266 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZNF154Q13106 437 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 CR1LQ2VPA4 569 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 Q6P435 159 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 ZFP62Q8NB50 900 aaPredicted RBP4.6□□□□□ -1.67
VPS50-202ENST00000305866 TUBG2Q9NRH3 451 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 LRFN1Q9P244 771 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 WIPI2Q9Y4P8 454 aa4.6□□□□□ -1.67
VPS50-202ENST00000305866 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 LRP5LA4QPB2 252 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 C3orf80F5H4A9 247 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ST8SIA3O43173 380 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 PGLYRP1O75594 196 aaPredicted RBP4.59□□□□□ -1.67
VPS50-202ENST00000305866 SCTP09683 121 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 OPRM1P35372 400 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 NDUFA6P56556 154 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TDRG1Q3Y452 100 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 TPTE2P1Q5T6R2 138 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 FAM69BQ5VUD6 431 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ACSM6Q6P461 480 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 CYP2G1PQ6ZSU1 146 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 GBGT1Q8N5D6 347 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 OR5C1Q8NGR4 320 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 OR2AE1Q8NHA4 323 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 GPR146Q96CH1 333 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ZNF703Q9H7S9 590 aaPredicted RBP4.59□□□□□ -1.67
VPS50-202ENST00000305866 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.67
VPS50-202ENST00000305866 MTCH1Q9NZJ7 389 aa4.59□□□□□ -1.67
VPS50-202ENST00000305866 ATXN7L1Q9ULK2 861 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms