RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TOR2AQ5JU69 321 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 TMEM268Q5VZI3 342 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SELENOHQ8IZQ5 122 aaKnown RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 STOML3Q8TAV4 291 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 COQ2Q96H96 371 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SHARPINQ9H0F6 387 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 CDS2O95674 445 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 HEXAP06865 529 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SELLP14151 372 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 EGR1P18146 543 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 P2RX3P56373 397 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 AESQ08117 197 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 HMGN3Q15651 99 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 KIAA2026Q5HYC2 2103 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 FAM53AQ6NSI3 398 aaPredicted RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 GFRALQ6UXV0 394 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 CD177Q8N6Q3 437 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 BVESQ8NE79 360 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 PRR7Q8TB68 274 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 TAF9BQ9HBM6 251 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 BARX1Q9HBU1 254 aaPredicted RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 MED9Q9NWA0 146 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SH3BGRL2Q9UJC5 107 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 ZDHHC8Q9ULC8 765 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 PLCE1Q9P212 2302 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 IGLV3-9A0A075B6K5 115 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 NKX2-6A6NCS4 301 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 K7EPK0 472 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 PET100P0DJ07 73 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 CD200P41217 278 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 OR3A1P47881 315 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 VHLLQ6RSH7 139 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 MOB1BQ7L9L4 216 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 MRGPRGQ86SM5 289 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 FAM71E2Q8N5Q1 922 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 LRRC29Q8WV35 223 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 PHYHIPLQ96FC7 376 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SLC25A32Q9H2D1 315 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 SDHAF2Q9NX18 166 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 JKAMPQ9P055 326 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 UBE2J1Q9Y385 318 aaPredicted RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 LSM5Q9Y4Y9 91 aaKnown RBP5.5□□□□□ -1.53
USP47-201ENST00000305481 PCNX1Q96RV3 2341 aa5.5□□□□□ -1.53
USP47-201ENST00000305481 hCG_1807616A0A1W2PRN6 198 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 SCGB1D2O95969 90 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 UCP1P25874 307 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 CD40P25942 277 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 COL10A1Q03692 680 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 PDZD9Q8IXQ8 264 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 OR10V1Q8NGI7 309 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 OR4D5Q8NGN0 318 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 AIFM2Q9BRQ8 373 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 PIGMQ9H3S5 423 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 TMED3Q9Y3Q3 217 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 C12orf77C9JDV5 145 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 SCO1O75880 301 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 F2RP25116 425 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 RPL12P30050 165 aaKnown RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 KLF3P57682 345 aaPredicted RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 SNTB1Q13884 538 aaKnown RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 SLC35E4Q6ICL7 350 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 CLEC9AQ6UXN8 241 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 DMBX1Q8NFW5 382 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 OR1L1Q8NH94 360 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 RBPMSQ93062 196 aaKnown RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 BSCL2Q96G97 398 aaPredicted RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 MRPL37Q9BZE1 423 aaKnown RBP5.49□□□□□ -1.53
USP47-201ENST00000305481 RAXQ9Y2V3 346 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 ICE1Q9Y2F5 2266 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 IGKV1D-17A0A075B6S4 117 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 TMEM30CPA0ZSE6 113 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 SRRM5B3KS81 715 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 I3L521 148 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 IFNL4K9M1U5 179 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 THBDP07204 575 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 CFHR2P36980 270 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 CEACAM6P40199 344 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 GLIPR1P48060 266 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 SMIM21Q3B7S5 101 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 NMSQ5H8A3 153 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 ZNF695Q8IW36 515 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 BAP18Q8IXM2 172 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 CMTM1Q8IZ96 169 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 GCSAMQ8N6F7 178 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 TPRX1Q8N7U7 411 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 GALNT11Q8NCW6 608 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 MARVELD3Q96A59 401 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 OR2V2Q96R30 315 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 C11orf1Q9H5F2 150 aa5.49□□□□□ -1.53
USP47-201ENST00000305481 A0A0G2JRQ6 117 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 MEX3AA1L020 520 aaKnown RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 H0Y980 276 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 SPRY3O43610 288 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 ZNF737O75373 536 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 LHBP01229 141 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 PSG2P11465 335 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 PRDX2P32119 198 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 TMEM33P57088 247 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms