RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 OR4S1Q8NGB4 309 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 C7orf50Q9BRJ6 194 aaKnown RBP13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 TAS2R8Q9NYW2 309 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF230Q9UIE0 474 aaPredicted RBP13.19□□□□□ -0.3
SRGAP2C-201ENST00000304465 IGKV1D-17A0A075B6S4 117 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 IGKV1D-8A0A087WSZ0 117 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 A0A1B0GW55 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR2AT4A6NND4 320 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 HAND1O96004 215 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 NAPSAO96009 420 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 PSG2P11465 335 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 AMY2BP19961 511 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 AP3S2P59780 193 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 TRIM16LQ309B1 348 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4L9Q6RFH8 374 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 CCBE1Q6UXH8 406 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 CD177Q8N6Q3 437 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DEDD2Q8WXF8 326 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 LHX4Q969G2 390 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 TBX15Q96SF7 602 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 SPACA1Q9HBV2 294 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF222Q9UK12 451 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 KPTNQ9Y664 436 aa13.18□□□□□ -0.3
SRGAP2C-201ENST00000304465 RFPL4AA6NLU0 287 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 RFPL4AL1F8VTS6 287 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 CLDN34H7C241 214 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SIRPB1O00241 398 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SH2D1BO14796 132 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 PSPNO60542 156 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF735P0CB33 412 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 MMP9P14780 707 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF44P15621 663 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 NDUFB7P17568 137 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 DTYMKP23919 212 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 CBX5P45973 191 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SLC9A3R2Q15599 337 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 DEFB112Q30KQ8 113 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 GAPTQ8N292 157 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 DMRTB1Q96MA1 342 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 CMSS1Q9BQ75 279 aaKnown RBP13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SIRPDQ9H106 197 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SLC25A10Q9UBX3 287 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 SOX21Q9Y651 276 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 FBN3Q75N90 2809 aa13.17□□□□□ -0.3
SRGAP2C-201ENST00000304465 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MDFIC2A0A1B0GVS7 189 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 TMEM82A0PJX8 343 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 H3BUI4 141 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 FCGR3AP08637 254 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 HKR1P10072 659 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 TAS2R19P59542 299 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 AWAT1Q58HT5 328 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 RUSC1-AS1Q66K80 236 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MZT2BQ6NZ67 158 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF788Q6ZQV5 615 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 FGFRL1Q8N441 504 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 ANGPTL6Q8NI99 470 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 PLPPR1Q8TBJ4 325 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MAFIPQ8WZ33 124 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 TINAGL1Q9GZM7 467 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR14J1Q9UGF5 321 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 TRBV6-6A0A0A6YYG2 114 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MCRIP1C9JLW8 97 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 M0QYG6 137 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 HSPB6O14558 160 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 SIGLEC5O15389 551 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 HOXA3O43365 443 aaPredicted RBP13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF737O75373 536 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 FCN3O75636 299 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 IGHV1-69P01742 117 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 AKAIN1P0CW23 69 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 PRDX2P32119 198 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 CCR6P51684 374 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF880Q6PDB4 577 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 FIP1L1Q6UN15 594 aaKnown RBP13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 VMO1Q7Z5L0 202 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms