RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FAHD2BQ6P2I3 314 aaPredicted RBP11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BVESQ8NE79 360 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 FAHD2AQ96GK7 314 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
CHRFAM7A-201ENST00000299847 A0A1W2PQD3 144 aa11.83□□□□□ -0.51
CHRFAM7A-201ENST00000299847 ID4P47928 161 aa11.83□□□□□ -0.51
CHRFAM7A-201ENST00000299847 TBX15Q96SF7 602 aa11.83□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IL36RNQ9UBH0 155 aa11.83□□□□□ -0.51
CHRFAM7A-201ENST00000299847 IGKV3D-11A0A0A0MRZ8 115 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RPL36A-HNRNPH2H7BZ11 118 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 IGKV3-11P04433 115 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GFRA1P56159 465 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PARP11Q9NR21 331 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR2W1Q9Y3N9 320 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ACAA1P09110 424 aaPredicted RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 NANOS3P60323 173 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 KLF9Q13886 244 aaPredicted RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SIRT4Q9Y6E7 314 aaPredicted RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 KHDC3LQ587J8 217 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RBM38Q9H0Z9 239 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ADAM11O75078 769 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MEOX2P50222 304 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SUCLG1P53597 346 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LSM6P62312 80 aaKnown RBP11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GGTLC2Q14390 218 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF441Q8N8Z8 693 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ANAPC16Q96DE5 110 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
CHRFAM7A-201ENST00000299847 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 FBLL1A6NHQ2 334 aaKnown RBP11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SYNGR1O43759 233 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LOXL3P58215 753 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PERPQ96FX8 193 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 AKIRIN1Q9H9L7 192 aaPredicted RBP11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 A0A087X0M5 115 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 A0A1B0GX30 115 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 AREGP15514 252 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 HCP5Q6MZN7 132 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 TMEM91Q6ZNR0 172 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF826PQ6ZT77 177 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SLC35E3Q7Z769 313 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LRRC3BQ96PB8 259 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SF3B5Q9BWJ5 86 aaKnown RBP11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LRP5O75197 1615 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 J3QR06 171 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 KIR3DL2P43630 455 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 UQCRFS1P47985 274 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 NMUP48645 174 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 VSTM2AQ8TAG5 236 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ADTRPQ96IZ2 230 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 A0A1W2PP11 408 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 RIGQ13278 110 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 DCAF10Q5QP82 559 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR4C45A6NMZ5 311 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 NAT2P11245 290 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 WNT2BQ93097 391 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PGLYRP3Q96LB9 341 aa11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CXorf51AA0A1B0GTR3 108 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CTDSPLO15194 276 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 KIR2DL1P43626 348 aaPredicted RBP11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SPANXN1Q5VSR9 72 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR8G5Q8NG78 346 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SNRNP40Q96DI7 357 aaKnown RBP11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 C7orf77A4D0Y5 90 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GLRX2Q9NS18 164 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 FOXS1O43638 330 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 GUCD1Q96NT3 240 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SMPD2O60906 423 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 BTF3P20290 206 aaKnown RBP11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 SLC22A18ASQ8N1D0 253 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF519Q8TB69 540 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 OR4C12Q96R67 309 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ST6GALNAC2Q9UJ37 374 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZIC3O60481 467 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PRDX2P32119 198 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 CLDN18P56856 261 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 WIPI2Q9Y4P8 454 aa11.81□□□□□ -0.52
CHRFAM7A-201ENST00000299847 J3QT63 122 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 PLA2G10O15496 165 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 DCAF12L2Q5VW00 463 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 LSMEM1Q8N8F7 131 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MYOZ3Q8TDC0 251 aa11.8□□□□□ -0.52
CHRFAM7A-201ENST00000299847 MEGF10Q96KG7 1140 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms