RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 IL1F10Q8WWZ1 152 aa20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 ARL11Q969Q4 196 aa20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 TOLLIPQ9H0E2 274 aa20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 ALX4Q9H161 411 aaPredicted RBP20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 LINC00574Q9H8X3 128 aa20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 FBN2P35556 2912 aa20.37■□□□□ 0.85
GTF2A1-201ENST00000298173 MEX3AA1L020 520 aaKnown RBP20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 DHFRP00374 187 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 AADACP22760 399 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 SURF2Q15527 256 aaPredicted RBP20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 CARTPTQ16568 116 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 C17orf58Q2M2W7 97 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 MARVELD3Q96A59 401 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 MOB3AQ96BX8 217 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 PATZ1Q9HBE1 687 aaKnown RBP20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 C19orf12Q9NSK7 152 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 OR1A1Q9P1Q5 309 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 MALRD1Q5VYJ5 2156 aa20.36■□□□□ 0.85
GTF2A1-201ENST00000298173 hADV38S2A0JD32 116 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 PPYP01298 95 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 RPS2P15880 293 aaKnown RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 FPR2P25090 351 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 ECI1P42126 302 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 HTD2P86397 168 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 NEIL1Q96FI4 390 aaPredicted RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 SLC23A1Q9UHI7 598 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 LINC00312Q9Y6C7 94 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 TACC2O95359 2948 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 CELSR2Q9HCU4 2923 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 TRGV10A0A0A0MS01 117 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 F5H0A9 414 aaPredicted RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 GPR37O15354 613 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 ANXA7P20073 488 aaKnown RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 UCP3P55916 312 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 RPL31P62899 125 aaKnown RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 CADM3Q8N126 398 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 RFESDQ8TAC1 157 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 SCGB3A2Q96PL1 93 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 C5orf66Q9H5L9 145 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 BARX1Q9HBU1 254 aaPredicted RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 ZNF221Q9UK13 617 aa20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 UBE2J1Q9Y385 318 aaPredicted RBP20.35■□□□□ 0.85
GTF2A1-201ENST00000298173 KBTBD11-OT1A0A1B0GTJ5 212 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 F2RL2O00254 374 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 SPINT2O43291 252 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 RLN1P04808 185 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 VSIG10L2P0DP72 767 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 ZBTB25P24278 435 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 IL2RGP31785 369 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 PDLIM4P50479 330 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 ATP5J2P56134 94 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 TMEM200BQ69YZ2 307 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 RTBDNQ9BSG5 229 aaPredicted RBP20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 GSX2Q9BZM3 304 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 FXYD6Q9H0Q3 95 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 TAS2R3Q9NYW6 316 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 CALYQ9NYX4 217 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 CLN8Q9UBY8 286 aa20.34■□□□□ 0.85
GTF2A1-201ENST00000298173 PTPN13Q12923 2485 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 C7orf66A4D0T2 115 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 IL5P05113 134 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 NLRC3Q7RTR2 1065 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 OR8B3Q8NGG8 313 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 OR8B2Q96RD0 313 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 BEX2Q9BXY8 128 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 BEX1Q9HBH7 125 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 LPAR3Q9UBY5 353 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 OR2W1Q9Y3N9 320 aa20.33■□□□□ 0.85
GTF2A1-201ENST00000298173 ZNF729A6NN14 1252 aaPredicted RBP20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 CEACAM6P40199 344 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 LOXL3P58215 753 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 ZNF273Q14593 569 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 WDR25Q64LD2 544 aaPredicted RBP20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 SLC25A42Q86VD7 318 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 OR52L2PQ8NGH6 319 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 GHITMQ9H3K2 345 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 ALG5Q9Y673 324 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 A0A0A6YYJ9 748 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 PRAF2O60831 178 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 BCAP31P51572 246 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 BAMBIQ13145 260 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 GLDNQ6ZMI3 551 aaPredicted RBP20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 LDLRAD3Q86YD5 345 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 H1FXQ92522 213 aaKnown RBP20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 BPESC1Q9GZL8 116 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 RDH8Q9NYR8 311 aa20.32■□□□□ 0.84
GTF2A1-201ENST00000298173 YLPM1P49750 1951 aaKnown RBP20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 TRBV23-1A0A0A0MS06 115 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 IGKV1D-13A0A0B4J2D9 117 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 HSPA12AO43301 675 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 IGKV1-13P0DP09 117 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 FXYD4P59646 89 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 HIST2H2BCQ6DN03 193 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 FAM53AQ6NSI3 398 aaPredicted RBP20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 ADAD2Q8NCV1 583 aaKnown RBP20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 OR2S2Q9NQN1 319 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 ZNF69Q9UC07 566 aa20.31■□□□□ 0.84
GTF2A1-201ENST00000298173 CTSDP07339 412 aaPredicted RBP20.3■□□□□ 0.84
GTF2A1-201ENST00000298173 ZNF728P0DKX0 622 aa20.3■□□□□ 0.84
GTF2A1-201ENST00000298173 HERV-K104P61576 105 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms