RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 C3orf80F5H4A9 247 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 LGALS8O00214 317 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 TSPAN9O75954 239 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 PTBP3O95758 552 aaKnown RBP8.7□□□□□ -1.02
RFC4-201ENST00000296273 CST4P01036 141 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 CSTBP04080 98 aaKnown RBP8.7□□□□□ -1.02
RFC4-201ENST00000296273 AMY2AP04746 511 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A15PP0C7V4 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A13PP0C7W8 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A14PP0C7W9 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM90A24PP0C7X0 464 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 MGMTP16455 207 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAHP16930 419 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 OR3A4PP47883 348 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 TAS2R31P59538 309 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM3AP98173 230 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 SNAI3Q3KNW1 292 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 DHRS7BQ6IAN0 325 aaPredicted RBP8.7□□□□□ -1.02
RFC4-201ENST00000296273 LPCAT3Q6P1A2 487 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 IDO2Q6ZQW0 420 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 Q6ZSV7 163 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 SLC36A1Q7Z2H8 476 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 REC114Q7Z4M0 266 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 ASCC1Q8N9N2 400 aaKnown RBP8.7□□□□□ -1.02
RFC4-201ENST00000296273 OR51S1Q8NGJ8 323 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 OR51T1Q8NGJ9 327 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM110DQ8TAY7 271 aaPredicted RBP8.7□□□□□ -1.02
RFC4-201ENST00000296273 DMRTB1Q96MA1 342 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 CHST6Q9GZX3 395 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 UFSP2Q9NUQ7 469 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 CTSZQ9UBR2 303 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 FAM96BQ9Y3D0 163 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 KPTNQ9Y664 436 aa8.7□□□□□ -1.02
RFC4-201ENST00000296273 DOCK11Q5JSL3 2073 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 A0A0U1RQK1 487 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 TMEM82A0PJX8 343 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 TMEM235A6NFC5 223 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OOEPA6NGQ2 149 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 MFNGO00587 321 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 ADAM20O43506 726 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OR2A4O95047 310 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 RLN1P04808 185 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 FCER2P06734 321 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 FBP1P09467 338 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 TMEM225BP0DP42 221 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 GUCA2AQ02747 115 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 RSU1Q15404 277 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OR8G1Q15617 311 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 MOGAT2Q3SYC2 334 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 SLC22A6Q4U2R8 563 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 PRAMEF6Q5VXH4 476 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OR10K2Q6IF99 312 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 HOGA1Q86XE5 327 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 Q8NFD4 153 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OR11H7Q8NGC8 314 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 ZNF431Q8TF32 576 aaPredicted RBP8.69□□□□□ -1.02
RFC4-201ENST00000296273 CAPSLQ8WWF8 208 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 OR2A7Q96R45 310 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 VPREB3Q9UKI3 123 aa8.69□□□□□ -1.02
RFC4-201ENST00000296273 FOXI3A8MTJ6 420 aaPredicted RBP8.68□□□□□ -1.02
RFC4-201ENST00000296273 FABP7O15540 132 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ZNF735P0CB33 412 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 PTHLHP12272 177 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 DTYMKP23919 212 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ZP1P60852 638 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 GMFBP60983 142 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ARF6P62330 175 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 MZT1Q08AG7 82 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ARFRP1Q13795 201 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 SURF2Q15527 256 aaPredicted RBP8.68□□□□□ -1.02
RFC4-201ENST00000296273 GRK1Q15835 563 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 BEAN1Q3B7T3 259 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 C11orf88Q6PI97 169 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ZNF767PQ75MW2 155 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 MRPL21Q7Z2W9 205 aaKnown RBP8.68□□□□□ -1.02
RFC4-201ENST00000296273 SPERTQ8NA61 448 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 TMEM104Q8NE00 496 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 OR8S1Q8NH09 359 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 OR4K15Q8NH41 348 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 HIST1H2AAQ96QV6 131 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 KCNK15Q9H427 330 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 ZNRD1Q9P1U0 126 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 KAAG1Q9UBP8 84 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 MPC1Q9Y5U8 109 aa8.68□□□□□ -1.02
RFC4-201ENST00000296273 GPR37O15354 613 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 OPN1MWP04001 364 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 OPN1MW2P0DN77 364 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 OPN1MW3P0DN78 364 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 GNB3P16520 340 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 HLA-GP17693 338 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 ACKR3P25106 362 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 BLVRBP30043 206 aaPredicted RBP8.67□□□□□ -1.02
RFC4-201ENST00000296273 TMEM50BP56557 158 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 ZNF92Q03936 586 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 FGL1Q08830 312 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 PDZK1IP1Q13113 114 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■■■■□ 21.1
RFC4-201ENST00000296273 C4orf46Q504U0 113 aa8.67□□□□□ -1.02
RFC4-201ENST00000296273 KPRPQ5T749 579 aaPredicted RBP8.67□□□□□ -1.02
RFC4-201ENST00000296273 ELP2Q6IA86 826 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms